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gwc2_scaffold_1919_44

Organism: GWC2_OD1_42_20

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(45536..46774)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKS47376.1}; TaxID=1618756 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_42_20.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 412.0
  • Bit_score: 800
  • Evalue 8.10e-229
RNA polymerase, sigma 70 subunit, rpod subfamily KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 421.0
  • Bit_score: 358
  • Evalue 3.70e-96
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 356
  • Evalue 1.00e+00

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Taxonomy

GWC2_OD1_42_20 → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1239
ATGCCAAATAACAAAAATACAAAAAAGCCTAGCACAAAAAAGGCAGTAAAGAAGACCGCCAAAAAACCTCCCAAAAGAGATGTTAGGAAGAATGTAGTTTCAAAAAAGCCCGTGAAAAAGGCTATCAAAAAAGCTATTGTAAAAAAAGTAGTTGTAAAGAAGGCTACAAAAAAAGTTCCAACAAAGAAAAGTTCGACGGAGGGGTGGGAGCAAAAAGCGCAACTTCTTATTTTGAAAGGTCGCGGACGTGGTTTTATCACATATAATGAAATTCTAAAAGAGTTTCCTGCAGTTGAGCAAGATGTTATTTTTCTTGACACTCTGTATGAGAAGCTTGGTGATGCTGGTGTGGATATTCTCGAAAGTGGCGGGCTACTTGACCTTGAGCCGGAAGAAGTTTTGACCCATAAAAAATATACTTACAAGAGTGGTGATTCATCATACGACTCTATTCAAATGTATTTGAAGGAAATCGGTCAGTACCCGCTTCTCTCAGCGAGTGAGGAGCGCGACCTCGCCCAGCGTATCGAGCTTGGCGACGAAGAGGGGAAAAACCTTCTCGCGCGAGCGAATCTCCGCCTCGTAGTATCTATTGCAAAGAAATATGTTGGCAGAAGCGCTGACCTAACCCTCCTAGACCTTATTCAAGAAGGGAACATTGGCCTTTTTAAGGGATACAAGTTTTCTACATATGCGACATGGTGGATTCGCCAGGCTATTACACGCGCTCTTGCGGATCAGTCGCGTACAATCCGTATCCCTGTGCACATGGTGGAGACAATCTCAAAATATAAGCAGGTCGTACGTCGCCTGTCGCAGGACCTAGGGCGCGAACCACTTCCTGGAGAAGTTGCTACTGAAATGGGGCTTGATGTTGAAAAGATTTATAACATCAAAAAAATTGATCAGGATACCGTGTCCCTCGAAAAGCCGATCGGTGATGATGATGACAAATCTACTCTAGGCGAATTTATTGCAGACGACAAGATTCTTTCACCAGCACAGGACTCGGCACAGCGTATTCTGTCTGACCAAGTAAAGGAAATCCTAAATGACCTTTCTGAAAAGGAGCGTAAGATACTTGAACTTAGGCACGGGCTTGTTGATGGAGTAGTCCATACACTAGAAGAAGTAGGTCGTGAGTTTCAGGTTACTCGTGAGCGTATCCGACAGATTGAAGCAAAAGCGATTGAAAAGATTCGATCCCATGATAAAGTGGATAAGCTGCGAAATTACTAG
PROTEIN sequence
Length: 413
MPNNKNTKKPSTKKAVKKTAKKPPKRDVRKNVVSKKPVKKAIKKAIVKKVVVKKATKKVPTKKSSTEGWEQKAQLLILKGRGRGFITYNEILKEFPAVEQDVIFLDTLYEKLGDAGVDILESGGLLDLEPEEVLTHKKYTYKSGDSSYDSIQMYLKEIGQYPLLSASEERDLAQRIELGDEEGKNLLARANLRLVVSIAKKYVGRSADLTLLDLIQEGNIGLFKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETISKYKQVVRRLSQDLGREPLPGEVATEMGLDVEKIYNIKKIDQDTVSLEKPIGDDDDKSTLGEFIADDKILSPAQDSAQRILSDQVKEILNDLSEKERKILELRHGLVDGVVHTLEEVGREFQVTRERIRQIEAKAIEKIRSHDKVDKLRNY*