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GWC2_NC10X_70_24_gwc2_scaffold_59710_4

Organism: Candidatus Rokubacteria bacterium GWC2_70_24

near complete RP 44 / 55 MC: 2 BSCG 44 / 51 MC: 2 ASCG 11 / 38
Location: 1672..2202

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor id=4753762 bin=GWC2_Methylomirabilis_70_24 species=Kineosphaera limosa genus=Kineosphaera taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 177.0
  • Bit_score: 356
  • Evalue 1.20e-95
rpoE1; RNA polymerase sigma factor RpoE1; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 177.0
  • Bit_score: 262
  • Evalue 5.80e-67
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 178.0
  • Bit_score: 151
  • Evalue 1.70e-34

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 531
GTGGCCCTCGTCCATCTGGATGCGCTCCACCGGAGCGCTCTCCGGCTCACCCACAATCGGCCGGAGGCGGAAGACCTGGTGCAGGAGACCTTTCTCCGTGCCTTCAGGAGCTTCCACCGCTTCAACCCGGGCACCAACTGCCGCGCCTGGCTCTTCACGATTCTCCGGAACGCCTTCCTCAACCGGATCCGGCAGGGCTCGCACGAGGTGCTCGAGGACGATCCGGCGGCCTGGGAGTCGGCGTCGGAGAGCGTCACCCAGCCAGCCGGGGGCGGGACGCACCCGCAAGAGGAGTTCTTCCAGACCGTGCTCCACGGAGACGTGGACAGGGCGCTCAAGGCGCTGCCGCTGGTCTTCAGGGAGGCCGTCATTCTCGCGGATCTCGAGGGCCTGAACTACAAGGAGATCGGCCAGGTGCTGGGCTGCCCCCCCGGGACGGTCATGTCGCGGCTCTCGAGAGGTCGGGGGCTGCTCCGCCAGGCGCTCGGCCGCTTCGCCCGAGAGCACGGCTACGTGAAGGAGTCGGAATGA
PROTEIN sequence
Length: 177
VALVHLDALHRSALRLTHNRPEAEDLVQETFLRAFRSFHRFNPGTNCRAWLFTILRNAFLNRIRQGSHEVLEDDPAAWESASESVTQPAGGGTHPQEEFFQTVLHGDVDRALKALPLVFREAVILADLEGLNYKEIGQVLGCPPGTVMSRLSRGRGLLRQALGRFAREHGYVKESE*