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gwc2_scaffold_2507_23

Organism: GWC2_OD1_45_15

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 10 / 38
Location: 22888..23439

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:KKT94377.1}; TaxID=1618973 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_45_11.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 361
  • Evalue 5.60e-97
RNA polymerase, sigma-E factor; heat shock and oxidative stress KEGG
DB: KEGG
  • Identity: 32.6
  • Coverage: 184.0
  • Bit_score: 128
  • Evalue 2.70e-27
RNA polymerase sigma factor, sigma-70 family similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 128
  • Evalue 2.00e+00

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Taxonomy

GWF2_OD1_45_11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGACGGATTTGTCGCAGGAACGCGAGCTGGTCATAAATGCCCAAAAAAACCCCGCGGCTTTTAATAAACTCTATCAGCTCTATTTTGATAAAATATACCATTTTATTTTAGCCCGTGCCGGCCAAGTGGAACTGGCAGAAGACATTACCTCGCAAACCTTTGTAAACGCCCTGGAAAACATGGCTAAATTCAGGTGGCGTAATGTTTCCTTTGGCGCCTGGCTTTACCGCATCGCCATCAATAACCTTAATTCTTATTACCGCAAACATAACAGGCTGGTGGTAACCGAAGAGGAAACCTTGATCAGCCTGGCTGATCAGCAACTGCCGCCTCTGGAGCCTTACGCCGACTTTGACGAACAAATCAGGATCACGGAACTAAAAAAAGCGGTAGACCAACTGCCGGATTTTGAAAAAAACCTGGTGGCCCTAAGATATTTTCAGGAAAAAAGTTACGAAGAAATTGCGGAAATTCTCAACCTGTCAGTTAATGCCGTGGGCGTTAAACTGCACCGCGCCTTAAAAAAGGTCAGAAAAATCATCAATCTATAA
PROTEIN sequence
Length: 184
MTDLSQERELVINAQKNPAAFNKLYQLYFDKIYHFILARAGQVELAEDITSQTFVNALENMAKFRWRNVSFGAWLYRIAINNLNSYYRKHNRLVVTEEETLISLADQQLPPLEPYADFDEQIRITELKKAVDQLPDFEKNLVALRYFQEKSYEEIAEILNLSVNAVGVKLHRALKKVRKIINL*