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gwc2_scaffold_1744_17

Organism: GWC2_OD1_42_12

partial RP 36 / 55 MC: 1 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 14047..15333

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKS35054.1}; TaxID=1618926 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_12.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 428.0
  • Bit_score: 833
  • Evalue 1.50e-238
RNA polymerase, sigma 38 subunit, RpoS KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 370.0
  • Bit_score: 382
  • Evalue 1.90e-103
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 381
  • Evalue 2.00e+00

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Taxonomy

Parcubacteria bacterium GW2011_GWC2_42_12 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1287
ATGTCAAAGAAAAATAAGAAAAATAAAGGCGGCTTTAAGAAAAAAAGATTTCAACCACCGGCGAAACCCAAAGCAAAAAAGCAATATTTTAGGAGATATGCCAGGAAGATGAAAAAATCCGCTAAGGGCGCTATATCCACCAGCAAGCATAGAGAAAACAGGAAGAAAGCGAAAGTAGCGGTTGAGCATCAAATAATTAAGCCGACGGACGAGCAGATAAAGAATTTGATTGTTAAAGGCCGGTCGCGCGGCTTTATCACCGAAACCGAATTGTTGCATATTTTCCCTGAAGTTGAAGAATATATTTATGATTATGAATTGACTTTGGAGGAGTTGCAGAAAAACGGCATTCAAATTATTGAAGACACGGGCGGGTTTTTAGGTCTTGGCGATGATATAAAGAAGAAAACCTCGCAAATTAGCGGCTTTAATGAAAAGAAAAAATTTGACATTTCTGAATTAAGCGCCGATTCCATCCAGATGTATTTAAGGGAAATCGGCAAAGTGCCGCTCTTATCCGGCGCCGAAGAAATTGAATTGGCTAAGCGCAAGGAAAAAGGCGATAAAGAGGCGGAGAAGAAAATTATTGAAGCCAATTTGCGCTTAGTCGTTTCCATCGCCAAAAAATTTACCGGTTCCAAGGGTTTAAGTTTGTTGGATTTGATTCAGGAAGGCAATATCGGTTTGTTCCGCGCGGTGGAAAAATTTGAATACCGCAAGGGCTATAAGTTTTCCACTTATGCCACTTGGTGGATTCGACAGGCGATTACCCGAGCGCTGGCCGATCAATCCCGCACCATTAGAATTCCGGTGCATATGGTGGAAACAATCAATAAGTTTCAGCAGGTTCAGCGTCAGCTGATTCAGGACTTGGGCCGCGAGCCGCTGCCCGAAGAAATAGCCGCCGAGATGGGCGAGGAGATTGATAAGGTTAGGCATGTCATAAAAATTTCCCAGGACACGATTTCTTTGGAAACGACCATCGGCGAAGACGACGAAGATTCAACTTTGGAAGATTTTATTGAAGACATAAAGAATGTGTCGCCCGACCGTTCAGCCGCTTTGCGCTTATTAAAAGATTATGTGAAGTCGGTAATTGCCGAATTAACGCCGCGCGAACAGAAAATTTTGGAAATGCGTTTTGGTTTAACAGATGGCATAGCTCACACTCTAGAAGAAGTGGGGCAGGAGTTTGATGTTACGCGCGAACGGATCAGGCAGATTGAAGCCAAAGCCATAGAGAGGATTCAAAAGCACCCGGGCATTAAGAAGCTAAGAGACTATTAG
PROTEIN sequence
Length: 429
MSKKNKKNKGGFKKKRFQPPAKPKAKKQYFRRYARKMKKSAKGAISTSKHRENRKKAKVAVEHQIIKPTDEQIKNLIVKGRSRGFITETELLHIFPEVEEYIYDYELTLEELQKNGIQIIEDTGGFLGLGDDIKKKTSQISGFNEKKKFDISELSADSIQMYLREIGKVPLLSGAEEIELAKRKEKGDKEAEKKIIEANLRLVVSIAKKFTGSKGLSLLDLIQEGNIGLFRAVEKFEYRKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETINKFQQVQRQLIQDLGREPLPEEIAAEMGEEIDKVRHVIKISQDTISLETTIGEDDEDSTLEDFIEDIKNVSPDRSAALRLLKDYVKSVIAELTPREQKILEMRFGLTDGIAHTLEEVGQEFDVTRERIRQIEAKAIERIQKHPGIKKLRDY*