ggKbase home page

gwd1_scaffold_1874_4

Organism: GWD1_OD1_44_10_partial

partial RP 25 / 55 BSCG 28 / 51 ASCG 6 / 38
Location: comp(1929..3209)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKT38060.1}; TaxID=1618788 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 426.0
  • Bit_score: 832
  • Evalue 3.40e-238
RpoD subfamily RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 422.0
  • Bit_score: 377
  • Evalue 4.60e-102
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 377
  • Evalue 5.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA1_OD1_44_13 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGCCGAAAAAAACTACAAATAAAAGTTCACGTCCAAGACGAGAATCTGCTGATTCTAGAATCCACACGAAACCAGTAGTAAAGAAAACTGCAAAAAAACCAGTAAAAAAAGCTGTCGTTAAGAAGGTGGCAAAAAAAGTAGCCTATAAAAAAGCCGTTCCCAAAAAGGCACCAGCAAAGGCAAAAAAGCCAGTTGCAAAGAAAAAATCAACTGAAGGTTGGGAGCAAAAAGCGCAAATTCTTATTCTCAAGGGTCGCGGTCGCGGGTTCATAACATACAACGAAATTCTTAAGGAATTTCCTATGGTGGAGCAGGATGTGATTTTTCTAGATACACTGTATGAAAAACTCGGTGATGCTGGCGTGGACATACTTGAAAGTGGCGGTCTTTTAAACCTTGAGCCAGAGGAAGTTTTAACTCATAAAAAATACACATACAAAAGCGGTGACTCCTCGTATGACTCTATTCAAATGTATTTGAAAGAGATTGGTCAGTACCCGCTTCTTACAGCTGGGGAGGAGCGTGATCTTGCTCAGCGTATTCAGATGGGGGACGAGGAAGGCAAAAACCTTCTCGCTCGCGCGAACCTTCGTCTCGTGGTTTCCATCGCTAAAAAATATGTTGGCAGAAGCGCTGACCTCACTCTCCTAGACCTTATTCAGGAGGGTAATATCGGCCTATTTAAAGCAGTGGAAAAGTTTGATTGGGAGAAGGGTTACAAGTTTTCAACATACGCAACGTGGTGGATTCGTCAGGCTATCACGCGCGCGCTCGCGGACCAGTCGCGCACTATCCGCATCCCAGTGCACATGGTGGAAACTATTTCAAAGTACAAGCAAGTGGTGCGTCGCTTGTCACAGGATCTTGGTCGTGAACCGCTTCCAGGAGAGGTTGCCACAGAGATGGGTCTTGATGTGGAGAAGATTTACAACATTAAGAAAATTGACCAAGACACCGTCTCTCTTGAAAAGCCGATTGGAGATGATGATGACAAATCAACGCTGGGTGAATTTATTGCCGATGACAAAATTCTTTCTCCTGCGCAGGATTCAGCTCAGAGAATTCTATCTGACCAAGTGAAAGAAATTTTGAACGACCTTTCTGAAAAGGAGCGAAAGATTCTGGAGCTTAGGCACGGACTTGTGGATGGCGTAGTCCACACTCTTGAAGAAGTGGGCCGAGAGTTCCAGGTGACTCGTGAACGTATCAGACAGATTGAAGCAAAAGCGATTGAGAAGATTCGCGCGCACGACAAGGTGGATAAGTTGCGGAATTACTGA
PROTEIN sequence
Length: 427
MPKKTTNKSSRPRRESADSRIHTKPVVKKTAKKPVKKAVVKKVAKKVAYKKAVPKKAPAKAKKPVAKKKSTEGWEQKAQILILKGRGRGFITYNEILKEFPMVEQDVIFLDTLYEKLGDAGVDILESGGLLNLEPEEVLTHKKYTYKSGDSSYDSIQMYLKEIGQYPLLTAGEERDLAQRIQMGDEEGKNLLARANLRLVVSIAKKYVGRSADLTLLDLIQEGNIGLFKAVEKFDWEKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETISKYKQVVRRLSQDLGREPLPGEVATEMGLDVEKIYNIKKIDQDTVSLEKPIGDDDDKSTLGEFIADDKILSPAQDSAQRILSDQVKEILNDLSEKERKILELRHGLVDGVVHTLEEVGREFQVTRERIRQIEAKAIEKIRAHDKVDKLRNY*