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GWD2_RBX1_39_127_gwd2_scaffold_53

Search features with annotation key words

Displaying items 61-90 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_53_61
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(77224..79047)
DNA (1824bp) protein (608aa)
Polysaccharide biosynthesis protein CapD id=2030926 bin=GWD2_RBX1-related_39_127 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
nucleoside-diphosphate sugar epimerase Tax=GWF2_RBX1_38_17_curated
polysaccharide biosynthesis protein CapD
GWD2_RBX1_39_127_gwd2_scaffold_53_62
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(79050..79625)
DNA (576bp) protein (192aa)
LemA family protein id=2030927 bin=GWD2_RBX1-related_39_127 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
LemA family protein; K03744 LemA protein Tax=GWF2_RBX1_38_17_curated
LemA family protein
GWD2_RBX1_39_127_gwd2_scaffold_53_63
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(79669..80427)
DNA (759bp) protein (253aa)
Hypothetical conserved protein id=1860186 bin=GWE2_RBX1_39_32 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K06872 uncharacterized protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_53_64
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(80432..81184)
DNA (753bp) protein (251aa)
Putative uncharacterized protein id=1860184 bin=GWE2_RBX1_39_32 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cytoplasmic protein Tax=GWF2_RBX1_38_17_curated
cytoplasmic protein
GWD2_RBX1_39_127_gwd2_scaffold_53_65
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(81211..82179)
DNA (969bp) protein (323aa)
accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=GWF2_RBX1_38_17_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha id=2030930 bin=GWD2_RBX1-related_39_127 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha
GWD2_RBX1_39_127_gwd2_scaffold_53_66
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(82202..83050)
DNA (849bp) protein (283aa)
acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=GWF2_RBX1_38_17_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta id=2030931 bin=GWD2_RBX1-related_39_127 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
acetyl-CoA carboxylase, carboxyl transferase subunit beta
GWD2_RBX1_39_127_gwd2_scaffold_53_67
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


83393..83653
DNA (261bp) protein (87aa)
30S ribosomal protein S20 id=1860177 bin=GWE2_RBX1_39_32 species=Bacillus smithii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=GWF2_RBX1_38_17_curated
rpsT; ribosomal protein S20
GWD2_RBX1_39_127_gwd2_scaffold_53_68
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(83818..85956)
DNA (2139bp) protein (713aa)
Type II and III secretion system protein id=1860175 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type II and III secretion system protein; K02666 type IV pilus assembly protein PilQ Tax=GWF2_RBX1_38_17_curated
type II and III secretion system protein
GWD2_RBX1_39_127_gwd2_scaffold_53_69
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(85953..86924)
DNA (972bp) protein (324aa)
id=1860174 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860174 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_53_70
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(86958..87392)
DNA (435bp) protein (145aa)
id=2030946 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=1860173 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_53_71
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(87524..89095)
DNA (1572bp) protein (524aa)
id=2030948 bin=GWD2_RBX1-related_39_127 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=4212640 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_53_72
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(89106..89633)
DNA (528bp) protein (176aa)
id=1860171 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860171 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_53_73
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(89670..91259)
DNA (1590bp) protein (530aa)
id=1860169 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860169 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_53_74
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(91261..91752)
DNA (492bp) protein (164aa)
id=1860168 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860168 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_53_75
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(91770..92291)
DNA (522bp) protein (174aa)
Type IV fimbrial biogenesis protein FimT id=1860166 bin=GWE2_RBX1_39_32 species=Halomonas sp. HAL1 genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Type IV fimbrial biogenesis protein FimT Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_53_76
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(92428..92847)
DNA (420bp) protein (140aa)
Pilin (Bacterial filament) id=1860164 bin=GWE2_RBX1_39_32 species=Pseudanabaena biceps genus=Pseudanabaena taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
pilA; pilin; K02650 type IV pilus assembly protein PilA Tax=GWF2_RBX1_38_17_curated
pilA; pilin
GWD2_RBX1_39_127_gwd2_scaffold_53_77
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(92992..94203)
DNA (1212bp) protein (404aa)
Probable type 4 fimbrial assembly protein (PilC) id=1860162 bin=GWE2_RBX1_39_32 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type 4 fimbrial assembly protein (PilC); K02653 type IV pilus assembly protein PilC Tax=GWF2_RBX1_38_17_curated
type 4 fimbrial assembly protein (PilC)
GWD2_RBX1_39_127_gwd2_scaffold_53_78
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(94227..95933)
DNA (1707bp) protein (569aa)
Type II secretion system protein E (GspE) id=2030960 bin=GWD2_RBX1-related_39_127 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=GWF2_RBX1_38_17_curated
type II secretion system protein E (GspE)
GWD2_RBX1_39_127_gwd2_scaffold_53_79
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

96536..99706
DNA (3171bp) protein (1057aa)
SNF2-related protein id=1860158 bin=GWE2_RBX1_39_32 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
putative DEAD/DEAH box helicase Tax=GWF2_RBX1_38_17_curated
putative DEAD/DEAH box helicase
GWD2_RBX1_39_127_gwd2_scaffold_53_80
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(99712..100098)
DNA (387bp) protein (129aa)
response regulator receiver protein id=24608670 bin=RAAC11 species=Thermanaerovibrio velox genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=RAAC11 organism_group=Unknown_CP
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWD2_RBX1_39_127_gwd2_scaffold_53_81
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(100671..101570)
DNA (900bp) protein (300aa)
Thioredoxin reductase id=1860154 bin=GWE2_RBX1_39_32 species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
thioredoxin-disulfide reductase Tax=GWF2_RBX1_38_17_curated
thioredoxin-disulfide reductase
GWD2_RBX1_39_127_gwd2_scaffold_53_82
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(101580..102668)
DNA (1089bp) protein (363aa)
peptidase M29, aminopeptidase II; K01269 aminopeptidase [EC:3.4.11.-] Tax=GWF2_RBX1_38_17_curated
Peptidase M29, aminopeptidase II id=1860152 bin=GWE2_RBX1_39_32 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
peptidase M29, aminopeptidase II
GWD2_RBX1_39_127_gwd2_scaffold_53_83
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(102803..104866)
DNA (2064bp) protein (688aa)
signal transduction histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWF2_RBX1_38_17_curated
Two-component sensor kinase id=2030971 bin=GWD2_RBX1-related_39_127 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
signal transduction histidine kinase
GWD2_RBX1_39_127_gwd2_scaffold_53_84
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(104900..106255)
DNA (1356bp) protein (452aa)
Fe-S oxidoreductase id=4212609 bin=GWF2_OP9-related_38_17 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
Fe-S oxidoreductase Tax=GWF2_RBX1_38_17_curated
Fe-S oxidoreductase
GWD2_RBX1_39_127_gwd2_scaffold_53_85
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(106258..106884)
DNA (627bp) protein (209aa)
Uncharacterized protein id=1860114 bin=GWE2_RBX1_39_32 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
N-acetyltransferase GCN5 Tax=GWF2_RBX1_38_17_curated
acetyltransferase family protein
GWD2_RBX1_39_127_gwd2_scaffold_53_86
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(106899..108284)
DNA (1386bp) protein (462aa)
Radical SAM domain protein id=1860111 bin=GWE2_RBX1_39_32 species=Archaeoglobus profundus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
radical SAM protein Tax=GWF2_RBX1_38_17_curated
radical SAM protein
GWD2_RBX1_39_127_gwd2_scaffold_53_87
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(108478..108930)
DNA (453bp) protein (151aa)
Response regulator receiver protein id=1860107 bin=GWE2_RBX1_39_32 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWD2_RBX1_39_127_gwd2_scaffold_53_88
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(109214..110605)
DNA (1392bp) protein (464aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=1860102 bin=GWE2_RBX1_39_32 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
two component sigma54 specific Fis family transcriptional regulator Tax=GWF2_RBX1_38_17_curated
two component sigma54 specific Fis family transcriptional regulator
GWD2_RBX1_39_127_gwd2_scaffold_53_89
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(110645..111154)
DNA (510bp) protein (170aa)
ThiJ/PfpI domain-containing protein; K05520 protease I [EC:3.2.-.-] Tax=GWF2_RBX1_38_17_curated
ThiJ/PfpI domain-containing protein id=1860098 bin=GWE2_RBX1_39_32 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ThiJ/PfpI domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_53_90
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

111363..111479
DNA (117bp) protein (39aa)
id=1860096 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860096 Tax=GWF2_RBX1_38_17_curated
Displaying items 61-90 of 104 in total

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