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GWD2_RBX1_39_127_gwd2_scaffold_83

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Displaying items 151-172 of 172 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_83_151
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(151703..153052)
DNA (1350bp) protein (450aa)
mce related protein id=24610445 bin=RAAC11 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
mce related protein Tax=GWF2_RBX1_38_17_curated
Mammalian cell entry related domain protein
GWD2_RBX1_39_127_gwd2_scaffold_83_152
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(153052..153801)
DNA (750bp) protein (250aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
ABC transporter related protein id=1836305 bin=GWE2_RBX1_39_32 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC transporter; K02065 putative ABC transport system ATP-binding protein Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_83_153
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(153806..154573)
DNA (768bp) protein (256aa)
Uncharacterized protein id=2127657 bin=GWD2_RBX1-related_39_127 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ycf63; hypothetical protein; K02066 putative ABC transport system permease protein Tax=GWF2_RBX1_38_17_curated
protein of unknown function DUF140
GWD2_RBX1_39_127_gwd2_scaffold_83_154
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(154566..155423)
DNA (858bp) protein (286aa)
Putative carbohydrate kinase-like protein id=2127660 bin=GWD2_RBX1-related_39_127 species=Clostridium acidurici genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
carbohydrate kinase-like protein Tax=GWF2_RBX1_38_17_curated
carbohydrate kinase-like protein
GWD2_RBX1_39_127_gwd2_scaffold_83_155
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(155432..156064)
DNA (633bp) protein (211aa)
Methionine biosynthesis protein MetW id=2127663 bin=GWD2_RBX1-related_39_127 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
methionine biosynthesis protein MetW Tax=GWF2_RBX1_38_17_curated
methionine biosynthesis protein MetW
GWD2_RBX1_39_127_gwd2_scaffold_83_156
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(156095..157216)
DNA (1122bp) protein (374aa)
homoserine O-acetyltransferase (EC:2.3.1.31); K00641 homoserine O-acetyltransferase [EC:2.3.1.31] Tax=GWF2_RBX1_38_17_curated
homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase id=1836313 bin=GWE2_RBX1_39_32 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_83_157
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(157476..158243)
DNA (768bp) protein (256aa)
id=1836315 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1836315 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_83_158
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(158314..159114)
DNA (801bp) protein (267aa)
rRNA methylase id=2127668 bin=GWD2_RBX1-related_39_127 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
rRNA methylase; K03437 RNA methyltransferase, TrmH family Tax=GWF2_RBX1_38_17_curated
rRNA methylase
GWD2_RBX1_39_127_gwd2_scaffold_83_159
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(159111..159578)
DNA (468bp) protein (156aa)
ispF; 2-C-methyl-D-erythritol-2,4-cyclodiphosphate synthase (EC:4.6.1.12) Tax=GWF2_RBX1_38_17_curated
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase id=2127670 bin=GWD2_RBX1-related_39_127 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
GWD2_RBX1_39_127_gwd2_scaffold_83_160
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(159575..160267)
DNA (693bp) protein (231aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase id=1836359 bin=GWE2_RBX1_39_32 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tax=GWF2_RBX1_38_17_curated
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
GWD2_RBX1_39_127_gwd2_scaffold_83_161
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(160264..162084)
DNA (1821bp) protein (607aa)
Two-component sensor kinase id=1836361 bin=GWE2_RBX1_39_32 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
sensory transduction histidine kinase Tax=GWF2_RBX1_38_17_curated
sensory transduction histidine kinase
GWD2_RBX1_39_127_gwd2_scaffold_83_162
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(162147..162890)
DNA (744bp) protein (248aa)
Peptidase M24 id=1836363 bin=GWE2_RBX1_39_32 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
peptidase M24 Tax=GWF2_RBX1_38_17_curated
peptidase M24
GWD2_RBX1_39_127_gwd2_scaffold_83_163
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(162939..163373)
DNA (435bp) protein (145aa)
3-dehydroquinate dehydratase id=1836365 bin=GWE2_RBX1_39_32 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
3-dehydroquinate dehydratase, type II Tax=GWF2_RBX1_38_17_curated
3-dehydroquinate dehydratase, type II
GWD2_RBX1_39_127_gwd2_scaffold_83_164
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(163370..164524)
DNA (1155bp) protein (385aa)
3-dehydroquinate synthase id=1836367 bin=GWE2_RBX1_39_32 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
3-dehydroquinate synthase Tax=GWF2_RBX1_38_17_curated
3-dehydroquinate synthase
GWD2_RBX1_39_127_gwd2_scaffold_83_165
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(164517..165044)
DNA (528bp) protein (176aa)
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=GWF2_RBX1_38_17_curated
shikimate kinase (EC:2.7.1.71)
Shikimate kinase id=1836369 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_83_166
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(165055..165771)
DNA (717bp) protein (239aa)
ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] Tax=GWF2_RBX1_38_17_curated
ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH id=4066541 bin=GWF2_OP9-related_38_17 species=Methylophilales bacterium HTCC2181 genus=unknown taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GWD2_RBX1_39_127_gwd2_scaffold_83_167
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(165812..166306)
DNA (495bp) protein (165aa)
id=1836373 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1836373 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_83_168
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(166321..166800)
DNA (480bp) protein (160aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=GWF2_RBX1_38_17_curated
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase id=2127705 bin=GWD2_RBX1-related_39_127 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_83_169
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(166797..167342)
DNA (546bp) protein (182aa)
Putative methyltransferase id=1836376 bin=GWE2_RBX1_39_32 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RNA methylase Tax=GWF2_RBX1_38_17_curated
RNA methylase
GWD2_RBX1_39_127_gwd2_scaffold_83_170
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(167467..170541)
DNA (3075bp) protein (1025aa)
Type III site-specific deoxyribonuclease id=2127709 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal Tax=GWF2_RBX1_38_17_curated
Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal
GWD2_RBX1_39_127_gwd2_scaffold_83_171
Leptotrichia hofstadii, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(170593..172626)
DNA (2034bp) protein (678aa)
Type III restriction-modification system methylation subunit (EC:2.1.1.72)
Type III restriction-modification system, Mod subunit id=2127711 bin=GWD2_RBX1-related_39_127 species=Leptotrichia hofstadii genus=Leptotrichia taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EEX73605.1}; TaxID=634994 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia hofstadii F0254
GWD2_RBX1_39_127_gwd2_scaffold_83_172
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

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comp(172619..172819)
DNA (201bp) protein (67aa)
Putative uncharacterized protein id=2127714 bin=GWD2_RBX1-related_39_127 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_Lentisphaerae_45_14_curated
phage antirepressor protein
Displaying items 151-172 of 172 in total

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