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GWD2_RBX1_39_127_gwd2_scaffold_143

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Displaying items 31-60 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_143_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(32259..33362)
DNA (1104bp) protein (368aa)
Flagellar motor switch protein FliM id=1891867 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar motor switch protein FliM; K02416 flagellar motor switch protein FliM Tax=GWF2_RBX1_38_17_curated
flagellar motor switch protein FliM
GWD2_RBX1_39_127_gwd2_scaffold_143_31
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(33591..34433)
DNA (843bp) protein (281aa)
HDIG domain protein id=1792155 bin=GWD2_RBX1-related_39_127 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
HDIG domain-containing protein Tax=GWF2_RBX1_38_17_curated
HDIG domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_143_32
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(34471..35265)
DNA (795bp) protein (265aa)
chemotaxis protein CheR (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] Tax=GWF2_RBX1_38_17_curated
MCP methyltransferase, CheR-type (EC:2.1.1.80)
MCP methyltransferase, CheR-type id=1792156 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_143_33
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(35265..36317)
DNA (1053bp) protein (351aa)
response regulator receiver modulated CheB methylesterase; K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61] Tax=GWF2_RBX1_38_17_curated
Chemotaxis response regulator protein-glutamate methylesterase id=1891870 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver modulated CheB methylesterase
GWD2_RBX1_39_127_gwd2_scaffold_143_34
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(36327..36818)
DNA (492bp) protein (164aa)
protein CheD (EC:3.5.1.44); K03411 chemotaxis protein CheD [EC:3.5.1.44] Tax=GWF2_RBX1_38_17_curated
protein CheD (EC:3.5.1.44)
Probable chemoreceptor glutamine deamidase CheD id=1891871 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_143_35
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(36811..37470)
DNA (660bp) protein (220aa)
CheC family chemotaxis protein id=1891872 bin=GWE2_RBX1_39_32 species=Selenomonas sp. oral taxon 149 genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
CheC, inhibitor of MCP methylation; K03410 chemotaxis protein CheC Tax=GWF2_RBX1_38_17_curated
cheC; chemotaxis signal transduction protein
GWD2_RBX1_39_127_gwd2_scaffold_143_36
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(37492..38286)
DNA (795bp) protein (265aa)
Chaperone protein id=1792211 bin=GWD2_RBX1-related_39_127 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
heat shock protein Tax=GWF2_RBX1_38_17_curated
integrase
GWD2_RBX1_39_127_gwd2_scaffold_143_37
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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38507..38869
DNA (363bp) protein (121aa)
Putative uncharacterized protein id=1891874 bin=GWE2_RBX1_39_32 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K09137 hypothetical protein Tax=GWF2_RBX1_38_17_curated
protein of unknown function DUF190
GWD2_RBX1_39_127_gwd2_scaffold_143_38
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(39046..40509)
DNA (1464bp) protein (488aa)
lysyl-tRNA synthetase (class II); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=GWF2_RBX1_38_17_curated
Lysine--tRNA ligase id=1891875 bin=GWE2_RBX1_39_32 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
lysyl-tRNA synthetase (class II)
GWD2_RBX1_39_127_gwd2_scaffold_143_39
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(40548..41516)
DNA (969bp) protein (323aa)
tRNA-dihydrouridine synthase id=1792214 bin=GWD2_RBX1-related_39_127 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
nifR3 family TIM-barrel protein Tax=GWF2_RBX1_38_17_curated
nifR3 family TIM-barrel protein
GWD2_RBX1_39_127_gwd2_scaffold_143_40
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(41534..42268)
DNA (735bp) protein (245aa)
coaX; pantothenate kinase (EC:2.7.1.33); K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=GWF2_RBX1_38_17_curated
coaX; pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase id=1792215 bin=GWD2_RBX1-related_39_127 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_143_41
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(42309..43334)
DNA (1026bp) protein (342aa)
id=1891925 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1891925 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_143_42
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(43464..44588)
DNA (1125bp) protein (375aa)
Putative prokaryotic ATPase id=1792217 bin=GWD2_RBX1-related_39_127 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ATPase; K06921 Tax=GWF2_RBX1_38_17_curated
ATPase
GWD2_RBX1_39_127_gwd2_scaffold_143_43
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(44725..45615)
DNA (891bp) protein (297aa)
RluA; pseudouridylate synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWF2_RBX1_38_17_curated
Pseudouridine synthase id=4253022 bin=GWF2_OP9-related_38_17 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
RluA; pseudouridylate synthase
GWD2_RBX1_39_127_gwd2_scaffold_143_44
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(45602..46093)
DNA (492bp) protein (164aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] Tax=GWF2_RBX1_38_17_curated
Lipoprotein signal peptidase id=1891928 bin=GWE2_RBX1_39_32 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
lipoprotein signal peptidase
GWD2_RBX1_39_127_gwd2_scaffold_143_45
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(46272..47471)
DNA (1200bp) protein (400aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=GWF2_RBX1_38_17_curated
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase id=1792220 bin=GWD2_RBX1-related_39_127 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_143_46
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

47663..49744
DNA (2082bp) protein (694aa)
TPR repeat protein id=1891930 bin=GWE2_RBX1_39_32 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_143_47
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

49775..51388
DNA (1614bp) protein (538aa)
id=1792222 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=1891931 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_143_48
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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51438..52202
DNA (765bp) protein (255aa)
TonB protein id=1792223 bin=GWD2_RBX1-related_39_127 species=Vibrio sp. 16 genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Protein tonB2 Tax=GWF2_RBX1_38_17_curated
Protein tonB2
GWD2_RBX1_39_127_gwd2_scaffold_143_49
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

52614..54722
DNA (2109bp) protein (703aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=GWF2_RBX1_38_17_curated
Transcription-repair coupling factor id=1792224 bin=GWD2_RBX1-related_39_127 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
transcription-repair coupling factor
GWD2_RBX1_39_127_gwd2_scaffold_143_50
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

54894..56162
DNA (1269bp) protein (423aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] id=24609626 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC11 organism_group=Unknown_CP
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] Tax=GWF2_RBX1_38_17_curated
PpiC-type peptidyl-prolyl cis-trans isomerase
GWD2_RBX1_39_127_gwd2_scaffold_143_51
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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56152..56952
DNA (801bp) protein (267aa)
MazG family protein id=4253037 bin=GWF2_OP9-related_38_17 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
MazG family protein; K02499 tetrapyrrole methylase family protein / MazG family protein Tax=GWF2_RBX1_38_17_curated
MazG family protein
GWD2_RBX1_39_127_gwd2_scaffold_143_52
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

57012..57332
DNA (321bp) protein (107aa)
id=24609624 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
Septum formation initiator Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_143_53
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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57357..57851
DNA (495bp) protein (165aa)
hypothetical protein; K07571 S1 RNA binding domain protein id=24609623 bin=RAAC11 species=Bacillus sp. 10403023 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
hypothetical protein; K07571 S1 RNA binding domain protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_143_trna_1
unknown

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57859..57944
DNA (86bp)
transferRNA
GWD2_RBX1_39_127_gwd2_scaffold_143_54
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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58102..58866
DNA (765bp) protein (255aa)
id=1792231 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=1792231 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_143_55
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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59054..59497
DNA (444bp) protein (148aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=1891939 bin=GWE2_RBX1_39_32 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
two component, sigma54 specific, Fis family transcriptional regulator Tax=GWF2_RBX1_38_17_curated
two component, sigma54 specific, Fis family transcriptional regulator
GWD2_RBX1_39_127_gwd2_scaffold_143_56
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

59557..60696
DNA (1140bp) protein (380aa)
Glycosyl transferases group 1: TPR repeat protein id=1792235 bin=GWD2_RBX1-related_39_127 species=unknown genus=Lyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
group 1 glycosyl transferase Tax=GWF2_RBX1_38_17_curated
group 1 glycosyl transferase
GWD2_RBX1_39_127_gwd2_scaffold_143_57
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(60774..61682)
DNA (909bp) protein (303aa)
Putative uncharacterized protein id=1792237 bin=GWD2_RBX1-related_39_127 species=Leeuwenhoekiella blandensis genus=Leeuwenhoekiella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
transglutaminase-like superfamily protein Tax=GWF2_RBX1_38_17_curated
transglutaminase-like superfamily protein
GWD2_RBX1_39_127_gwd2_scaffold_143_58
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(61877..62884)
DNA (1008bp) protein (336aa)
id=1792238 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=24609618 Tax=GWF2_RBX1_38_17_curated
Displaying items 31-60 of 60 in total

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