ggKbase home page

GWD2_RBX1_39_127_gwd2_scaffold_168_31

Organism: Candidatus Margulisbacteria bacterium GWD2_39_127

near complete RP 49 / 55 BSCG 48 / 51 ASCG 10 / 38
Location: 29038..29808

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-28 subunit FliA/WhiG (EC:4.1.1.65); K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=GWF2_RBX1_38_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 256.0
  • Bit_score: 499
  • Evalue 3.10e-138
RNA polymerase sigma-28 subunit FliA/WhiG (EC:4.1.1.65) similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 269.0
  • Bit_score: 118
  • Evalue 4.00e-24
RNA polymerase sigma factor id=1959940 bin=GWE2_RBX1_39_32 species=Caldicellulosiruptor saccharolyticus genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 257.0
  • Bit_score: 499
  • Evalue 2.20e-138

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_RBX1_38_17_curated → RBX1 → Bacteria

Sequences

DNA sequence
Length: 771
ATGACGTTAAATGAAGCTGCTGAAACTGAGAATAAAGCAAAAACAATTGCGAAACTAGGTAAACTGAACGATAGTGTAGTTAAAGAGCATTTAGCAATGATTCAATCAATTTCGGCTAGTATTGCAGCTGGTGGAAAGCTTCCTCCTGGTATTTATTTTAATGACTTAATAAGTTATGGATATGAAGGTTTTCTTAAAGCTTATAGTAGTTTTGACCATGAAAAAGGCGCTCAATTTCAAACCTATGCAGCCTATCGGGTCCGAGGTGAAATATTAGATAGATTAAGAAAAGAATGGAAATATAGAAATCCGATCTCATACAAGTCTGTTCAGGCTAAGATTCAGGATAAAATCACCGAAGTTGTGCAAAGTACCTTAGAAATAGAGCAGGAAGGCGATCCTGAACCTAAAGAAGTTGGTGCAGAAGACGAAAAAAAAAGAAGAGCTGCCGACATCATTGCCAACTCCGCTGTAGTTTACATGTTGTCCCTAGATAATGAAGAAATTAAAGGACAATTGATTGGACAGGGGGATATCGCTGAAGAGTTGTTTACTGAAATGGAATTTTCAAACGAAAGAAAAATATTATGGGAAGAAGTTACCTTATTAACTGATCAGGAAAAAGATTTTGTCTACCTTTTTTATGAAAAAGAAAAAACACAAAAAGAAATTGCAGAGATTATGTCCGTGTCAAAAAGTAAGGTAAGCAGGTTGCATGTGAAAATCTTAAAAAAATTAAGAAACCGTCTTACTAAAAGATTAAACAATTAA
PROTEIN sequence
Length: 257
MTLNEAAETENKAKTIAKLGKLNDSVVKEHLAMIQSISASIAAGGKLPPGIYFNDLISYGYEGFLKAYSSFDHEKGAQFQTYAAYRVRGEILDRLRKEWKYRNPISYKSVQAKIQDKITEVVQSTLEIEQEGDPEPKEVGAEDEKKRRAADIIANSAVVYMLSLDNEEIKGQLIGQGDIAEELFTEMEFSNERKILWEEVTLLTDQEKDFVYLFYEKEKTQKEIAEIMSVSKSKVSRLHVKILKKLRNRLTKRLNN*