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gwe1_scaffold_2997_13

Organism: GWE1_OD1_43_8

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(9869..10174)

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor Tax=RIFOXYC2_FULL_RIF_OD1_03_42_11_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 101.0
  • Bit_score: 200
  • Evalue 1.60e-48
sigA; RNA polymerase major sigma-43 factor (sigma-A) KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 103.0
  • Bit_score: 124
  • Evalue 1.70e-26
RNA polymerase sigma factor RpoD similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 128
  • Evalue 8.00e+00

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Taxonomy

RIFOXYC2_FULL_RIF_OD1_03_42_11_curated → RIF-OD1-3 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 306
GTGGGTGAAGACGAAGAAGATAGCACCCTGGGAGATTTTATTGAAGATATAAAAACTGTTAGCCCAGACCGGGTGGCCGCTATGCAATTACTCAGGGATCATGTGCGGGATATTGTGAGTGAACTTACGCCCCGGGAGCAAAAAATATTGGAAATGCGTTTTGGTTTGCAGGATGGAGTATCGCATACCTTGGAGGAAGTGGGGCAGGAGTTCGGTGTCACTCGCGAACGTATTAGGCAAATTGAGGCTAAGGCTTTGGAGAAGATTCAGACGCATCTTAATATGCGCAAGCTTAAGGACTATTAG
PROTEIN sequence
Length: 102
VGEDEEDSTLGDFIEDIKTVSPDRVAAMQLLRDHVRDIVSELTPREQKILEMRFGLQDGVSHTLEEVGQEFGVTRERIRQIEAKALEKIQTHLNMRKLKDY*