ggKbase home page

gwe2_scaffold_2130_5

Organism: WS6_GWE2_33_157

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38
Location: comp(3717..4835)

Top 3 Functional Annotations

Value Algorithm Source
THUMP domain-containing protein; K06968 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] Tax=RIFOXYB1_FULL_WS6_33_15_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 372.0
  • Bit_score: 729
  • Evalue 2.10e-207
THUMP domain protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AY54_HERA2 similarity UNIREF
DB: UNIREF90
  • Identity: 34.0
  • Coverage: 0.0
  • Bit_score: 177
  • Evalue 6.00e+00
THUMP domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 347.0
  • Bit_score: 178
  • Evalue 4.70e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB1_FULL_WS6_33_15_curated → Dojkabacteria → Bacteria

Sequences

DNA sequence
Length: 1119
ATGGAAAAAACTGAAACTAAAGATTCTAATATAGATGACATATCCTTTTTAGAGGGGGTAGGAATTGAAACCAATGGAAAAGCCTCTGCATATTTGGTTACATTCACACCGTATTTTAGAAATGTCGCAAGAAGAGAGATAACGGATTTTGATTCTAGCATTAAATTTGAAAGGCCTATTTCTGATAGTATAGCACTGGTAACTTCCGCTAAGCCAAATGAAGAATTTATTGAAGAAATGAAAAAGGAATCTCCAATCTTTATTAAGCACATTATGCCCATAATGGGGGCTGGGGAAATTGAGGGGATATTAGATAAAGATAAAGTAAGCTTATTAGAAGCGGTTGATCAGATAGCAAATATAAAAACAGGAAGCAAATTTGCAGTTCAATGTAGAGTGATTAGTGGTGGATTGCCTTACTCTGCAAAAGATATTGAAGTATATGTTGGAGAAGCCTACTATAATAAGGGTAATATACCATCTTTTTCTGATAGAGATATCATTAATGAGGATATAGATATTATATCTATCCTTGTTCATGGTAAGACCTACTATGTTGGGTTTTCTAAAAGCAGTGATAATCTAAATTTTCATAGTGATGAACATAGAATAAGGGCTAGAGCAGGTAAAAGGGAAATCTCTAGAGCAGAGAGTAAGCTAATAGAAGCACTATCTACATTTAAAGTTGAATTAGATGGACACGGTACTGCACTTGATTTAGGAGCAGCTCCAGGTGGTTGGTCAAAAGTATTAGCAGATTATGGGTATAAGGTTTTAGCAGTAGATCCAGCAGCCTTACATCCCGATTTAGAACAAGATAGTAGGATTATACACATGAAGTCAAAGGCTCAAGATATTCAATTGGATGAGCCTTTAGACTTGATTGTAAATGATATGAATATGGATCCTCAGGAAACAGGAAAGATAATGAACGATATTGCACATCTTTTAAAAGATGGTGGGTTAGCAATTGTTACACTTAAACTTCCTGATCATGCACAAAGAAGTATAGAGGAGGCAGTAGCAATATTAGAAAAGGAATATGAAGTAGTTAAGATAAGGAGCTTGTTCCATAATAGGCAGGAAGTAACCGCGTTATTGCAAAGAAAAACAAAATAA
PROTEIN sequence
Length: 373
MEKTETKDSNIDDISFLEGVGIETNGKASAYLVTFTPYFRNVARREITDFDSSIKFERPISDSIALVTSAKPNEEFIEEMKKESPIFIKHIMPIMGAGEIEGILDKDKVSLLEAVDQIANIKTGSKFAVQCRVISGGLPYSAKDIEVYVGEAYYNKGNIPSFSDRDIINEDIDIISILVHGKTYYVGFSKSSDNLNFHSDEHRIRARAGKREISRAESKLIEALSTFKVELDGHGTALDLGAAPGGWSKVLADYGYKVLAVDPAALHPDLEQDSRIIHMKSKAQDIQLDEPLDLIVNDMNMDPQETGKIMNDIAHLLKDGGLAIVTLKLPDHAQRSIEEAVAILEKEYEVVKIRSLFHNRQEVTALLQRKTK*