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gwf1_scaffold_2022_7

Organism: GWF1_OD1_44_4

partial RP 36 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(4377..4952)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 386
  • Evalue 2.90e-104
ECF subfamily RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 181.0
  • Bit_score: 139
  • Evalue 7.20e-31
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 166
  • Evalue 5.00e+00

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Taxonomy

RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated → Moranbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGGATAAACAGAAATCCCTTTCGGACACTGCTTTAGTTGAACTGGCGACAAAAAATCCTGAATCGTTCGGGATTTTAATGGAACGGTATCAGGGACCGCTTTTTCACTATATCCGTCGAATCGCGCAGCTTTCCAAAGAGGATACGGAAGATTTACTGCAGGAAGTGTTCATTAAGATTTATCAAAAATTAAATGAATACAATGACGAGTTGAAATTTTCCAGCTGGGCATACCGCATCGCCCATAATCATGTCATTGACTATTTTCGCAAGACAAGCGCCAGACCGCGTACGAACTCGCTTGAAGACAGTGAATGGGAGAAGCTAATTCACTCCAGTGTTCATGTTGAGAAAGATATTGCTGACGGAGATTGCGCGAAAAAAATAAAAATTTGCATTGGCAATCTGCCCGTTCACTACAGAGAGGTACTCATTCTGCGATTTATCGAAGAAAAAGAATACGAAGAAATTATGGATATTCTAAAAAAACCGAAGGGAACAGTCGCGACGCTCATCAAACGCGGAAAAGAAATGCTGGTTAAAAGACTGGAAGAAGAAAATATTAATTGTTTTTAA
PROTEIN sequence
Length: 192
MDKQKSLSDTALVELATKNPESFGILMERYQGPLFHYIRRIAQLSKEDTEDLLQEVFIKIYQKLNEYNDELKFSSWAYRIAHNHVIDYFRKTSARPRTNSLEDSEWEKLIHSSVHVEKDIADGDCAKKIKICIGNLPVHYREVLILRFIEEKEYEEIMDILKKPKGTVATLIKRGKEMLVKRLEEENINCF*