ggKbase home page

gwf2_scaffold_237_23

Organism: GWF2_OD1_38_76

near complete RP 41 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(21340..21885)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=GWF2_OD1_38_76 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 181.0
  • Bit_score: 360
  • Evalue 1.20e-96
ECF subfamily RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 185.0
  • Bit_score: 116
  • Evalue 8.10e-24
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 123
  • Evalue 6.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_OD1_38_76 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGCAGAACGACATAGAAAAACTTTCAGATGAGGCGATCGTTGAACGGGTTAGGAAATCAGACCAGGAGTTTTATTCTGTGATAATGAAAAGATATCAAGATAGACTCATGAGATATGCTGGTGGATTAATTAAAGACAAGGATAAAGCTACAGACATTGTCCAGTCTTCTTTTATCAAGGCATTCATAAATCTAAACGGATTTGATACAAATAAAAAATTTTCCAGTTGGATATATAGAATAGTCCACAACGAGACGATGAATCTCATTGATAAAAATCAAAAAGAAGCAGTATTTCCTGATGGGTTTGATGTGGAGAGCGGTGAAGACATTGAGAAAGATTTTGAGAAAAAAGAAATTAAAGAAAAAATTGAAAAATGCCTTGCCGATATGCCCGTGCTTTATTCAGAACCCCTTTCCCTCTATTATTTAGATGAAAAATCGTATGAGGAGATAAGCGATATCTTGCAAATACCAATGGGCACTGTGGCTACTCGTATTAGTAGGGCAAAATTATTAATGAAAAAGTTATGTCAAAAGAACTAA
PROTEIN sequence
Length: 182
MQNDIEKLSDEAIVERVRKSDQEFYSVIMKRYQDRLMRYAGGLIKDKDKATDIVQSSFIKAFINLNGFDTNKKFSSWIYRIVHNETMNLIDKNQKEAVFPDGFDVESGEDIEKDFEKKEIKEKIEKCLADMPVLYSEPLSLYYLDEKSYEEISDILQIPMGTVATRISRAKLLMKKLCQKN*