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gwf2_scaffold_12308_5

Organism: GWF2_OD1_46_8

near complete RP 38 / 55 BSCG 42 / 51 MC: 1 ASCG 10 / 38
Location: 1989..2555

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWB1_Spirochaetes_48_6_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 372
  • Evalue 4.20e-100
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
  • Identity: 30.8
  • Coverage: 185.0
  • Bit_score: 100
  • Evalue 6.30e-19
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 99
  • Evalue 7.00e+00

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Taxonomy

GWB1_Spirochaetes_48_6_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 567
ATGAGAGGGGAAAAGCCCCAAAAACGTTCTCTTAACAGCATCAGCTGGAAGCGTGCGGATCAATTCGCAGGCGTATATGACGTGTATGCGAAAAAACTCTGGCGCCATATCTATCTCCGAACCAGCAGGCAAGAAGAAACGAACGATCTGGTCGCCGAGGTGTTCTTGAAGACATGGGAGTACCTGAAGTCAGGCAAGTCCATCAACAACATTCAGGCATTCCTGTACCGGTCCGCCCACAACAGTATCGTGGACTGGTACCGCAGCAGGAATAAGGTTGTTGAGCTTCAAACAAGCCTGGAAGAAGGAGAGTATGACGACCTCATGATCCAAGAAGACTCGACGGAACGGATTCTCCTGTCGGTGAGCGCGCGCATGAACGTGGAAAAAGTTCTCCGGCAGATTCCCGAGAACGAACGCAATTTGCTCATTATGCGATTCATCGACGAACTCGAAATAAAAGAAATTGCGAACGTCTTAGGGAAAACAACCGGGGCAGTCAGCGTCGGCATCCACCGGGCACTCAAATTATTCGAACAAAACCTGAAAACCAATGAAACCAAGTGA
PROTEIN sequence
Length: 189
MRGEKPQKRSLNSISWKRADQFAGVYDVYAKKLWRHIYLRTSRQEETNDLVAEVFLKTWEYLKSGKSINNIQAFLYRSAHNSIVDWYRSRNKVVELQTSLEEGEYDDLMIQEDSTERILLSVSARMNVEKVLRQIPENERNLLIMRFIDELEIKEIANVLGKTTGAVSVGIHRALKLFEQNLKTNETK*