ggKbase home page

S36_SO-2_scaffold_79092

Search features with annotation key words

Displaying items 91-120 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_79092_85
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(79551..80090)
DNA (540bp) protein (180aa)
id=5041691 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR4
S36_SO-2_scaffold_79092_86
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(80129..80809)
DNA (681bp) protein (227aa)
seg id=5800527 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_01
S36_SO-2_scaffold_79092_87
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(80867..81451)
DNA (585bp) protein (195aa)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GIH7_METTF
inosine-5'-monophosphate dehydrogenase
Tax=CG_Woesearch_02
S36_SO-2_scaffold_79092_88
unknown

Not on your lists

81766..82359
DNA (594bp) protein (198aa)

This feature has no annotations

S36_SO-2_scaffold_79092_89
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(82370..82786)
DNA (417bp) protein (139aa)
hypothetical protein id=5044683 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-binding protein
Tax=AR9
S36_SO-2_scaffold_79092_90
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(82783..83007)
DNA (225bp) protein (75aa)
hypothetical protein id=5044684 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR9
S36_SO-2_scaffold_79092_91

Not on your lists

comp(83065..83430)
DNA (366bp) protein (122aa)
Probable ribonuclease VapC n=1 Tax=Thermococcus sp. AM4 RepID=B7R4X0_9EURY id=5103339 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
PIN protein {ECO:0000313|EMBL:KHO50118.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
putative ribonuclease VapC
S36_SO-2_scaffold_79092_92

Not on your lists

comp(83423..83644)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50117.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
hypothetical protein
id=5103338 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
S36_SO-2_scaffold_79092_93
unknown

Not on your lists

83798..84286
DNA (489bp) protein (163aa)

This feature has no annotations

S36_SO-2_scaffold_79092_94
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(84276..86330)
DNA (2055bp) protein (685aa)
Minimal nucleotidyltransferase fused to HEPN domain id=5800529 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Minimal nucleotidyltransferase fused to HEPN protein
Tax=CG_Woesearch_01
S36_SO-2_scaffold_79092_95
unknown

Not on your lists

86505..87299
DNA (795bp) protein (265aa)

This feature has no annotations

S36_SO-2_scaffold_79092_96
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

87410..89341
DNA (1932bp) protein (644aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=SYT_THETN
Tax=CG_Woesearch_01
S36_SO-2_scaffold_79092_97
unknown

Not on your lists

89357..89494
DNA (138bp) protein (46aa)

This feature has no annotations

S36_SO-2_scaffold_79092_98
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

89548..89742
DNA (195bp) protein (65aa)
Tax=CG_Woesearch_03
S36_SO-2_scaffold_79092_99
unknown

Not on your lists

89752..90036
DNA (285bp) protein (95aa)

This feature has no annotations

S36_SO-2_scaffold_79092_100

Not on your lists

90116..91165
DNA (1050bp) protein (350aa)
Geranylgeranyl diphosphate synthase, type I {ECO:0000313|EMBL:KHO55006.1}; EC=2.5.1.1 {ECO:0000313|EMBL:KHO55006.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
geranylgeranyl diphosphate synthase, type I (EC:2.5.1.1)
polyprenyl synthetase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] id=5241589 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S36_SO-2_scaffold_79092_101

Not on your lists

comp(91170..91913)
DNA (744bp) protein (248aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] id=5048456 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; Undecaprenyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Tritrans,polycis-undecaprenyl-diphosphate synthase, geranylgeranyl-diphosphate specific
S36_SO-2_scaffold_79092_102
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

92035..92703
DNA (669bp) protein (223aa)
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
Ribulose-phosphate 3-epimerase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S318_THEOJ
S36_SO-2_scaffold_79092_103
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(92772..93002)
DNA (231bp) protein (77aa)
hypothetical protein id=5044933 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR4
S36_SO-2_scaffold_79092_104

Not on your lists

comp(93142..93621)
DNA (480bp) protein (160aa)
seg id=5041657 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO51723.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein
S36_SO-2_scaffold_79092_105

Not on your lists

93812..94777
DNA (966bp) protein (322aa)
deoxyhypusine synthase (EC:2.5.1.46)
deoxyhypusine synthase (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] id=5240806 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Deoxyhypusine synthase {ECO:0000313|EMBL:AJF59798.1}; EC=2.5.1.46 {ECO:0000313|EMBL:AJF59798.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
S36_SO-2_scaffold_79092_106
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

95046..95480
DNA (435bp) protein (145aa)
S-adenosylmethionine decarboxylase proenzyme (AdoMetDC)(SamDC) (EC:4.1.1.50)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=309799 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12).;"
S-adenosylmethionine decarboxylase proenzyme (AdoMetDC)(SamDC) n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YF21_DICT6
S36_SO-2_scaffold_79092_107
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

95576..96466
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFC6_9BACT
putative agmatinase
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
S36_SO-2_scaffold_79092_108
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(96445..97368)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IIT7_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB61632.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
S36_SO-2_scaffold_79092_109

Not on your lists

97487..98425
DNA (939bp) protein (313aa)
seg id=5043636 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46612.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S36_SO-2_scaffold_79092_110

Not on your lists

comp(98435..98836)
DNA (402bp) protein (134aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
PIN domain protein n=1 Tax=mine drainage metagenome RepID=T1B5Y6_9ZZZZ
nucleic acid-binding protein
S36_SO-2_scaffold_79092_111
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(98833..99081)
DNA (249bp) protein (83aa)
SpoVT/AbrB family transcription regulator n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HME2_THES4
SpoVT/AbrB family transcription regulator
Tax=RBG_16_Micrarchaeota_49_10_curated
S36_SO-2_scaffold_79092_112
unknown

Not on your lists

comp(99362..99943)
DNA (582bp) protein (194aa)

This feature has no annotations

S36_SO-2_scaffold_79092_113
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(99960..103178)
DNA (3219bp) protein (1073aa)
Isoleucine--tRNA ligase n=2 Tax=Dictyoglomus RepID=B5YF35_DICT6 id=5103221 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Isoleucine-tRNA ligase
Tax=AR20
S36_SO-2_scaffold_79092_114
unknown

Not on your lists

comp(103242..104306)
DNA (1065bp) protein (355aa)

This feature has no annotations

Displaying items 91-120 of 132 in total

View Taxonomy