ggKbase home page

S36_SO-2_scaffold_479114_28

Organism: Genasci_Feb2018_S36_SO-2_Woesearchaeota_48_19

near complete RP 31 / 55 MC: 2 BSCG 22 / 51 MC: 1 ASCG 35 / 38 MC: 2
Location: comp(18498..19763)

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate decarboxylase (EC:4.1.1.20) similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 420.0
  • Bit_score: 379
  • Evalue 1.20e-102
Diaminopimelate decarboxylase id=2578805 bin=GWF1_Spirochaetes_51_8 species=Methanothermobacter marburgensis genus=Methanothermobacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 416.0
  • Bit_score: 406
  • Evalue 1.90e-110
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 420.0
  • Bit_score: 460
  • Evalue 1.60e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_PLX_64_10 → Bacteria

Sequences

DNA sequence
Length: 1266
ATGATATCTGTAAAAAATAACAGGCTGTTTATTGGGGAGGTTGCGGCTTCCGGCCTTGCCAGGAGGTTTGGAACTCCTCTTTACGCCTATGATGAGGAAGCAATACGCTCAAAGGTGAGTGCCCTTGTCCAGAACATCGCCTATCGCCCGCTTAGGATTTTCTATGCTGCCAAGGCAAACACAAACCTCTCCGTCCTGAAAATAATAAGGGATGAGGGGGGGCAAAGCATTGGCATTGATGCTGTCTCTCCTGGTGAGATTGAAATTGCGTTGAAGGCAGGATTCAAGCCCGAGCAGGTAATCTTTACCTCAACCTCTGTTACTGATGATGAGATGAAGTTTGCCATCTCAAGGAAGGTTCTTGTGAATTGCGATTCGCTGTCGCAGCTGGAAAGGTATGGCAGGCTGAGTCCGGGTTCAAAGGTGTGCTTCAGGGTTAACCCTGACGTTGGCGCCGGGCATCACGGCCACGTTATTACCGGCGGTCCTGAAAGCAAGTTTGGCATCTTGGCGGGTGATGTTGGAAAGGCGTTTGCCATTGCCTCAAAATACGGTCTCAAAATTGTTGGCATCCACCAGCACATTGGCTCCGGAATTTTAGAGACTGGCAAGTTCCTGACTGCAATGAAGGTGCTTCTTTCGATTATTGAAAAGAACAAAAGCGGGCTGGGAGACCTTGAGTTTGTTGATTTCGGAGGAGGCATCGGTGTCCCTTACAGGCCTGGCCAGAAGCCGATCAACTTTGCCAAGTTTGGTGCTGCTGTCAGCAAACTGTTTGAAACCTTTTGCAGCAGCTTTGGCAAGAAGCTGTCTTTAACGATTGAGCCCGGAAGGTTCATTGTGGCAGAGTCAGGAGCCCTGCTTTGCACCGTAAACACGATAAAGCAGACCCCTAAGCACAAATTCGTCGGCGTTGATACCGGCTTCCACCACCTGATTAGGCCAATGGCTTACGGCTCTTATCATCCGATAGTTGTCGTTGATAATTGCGGCAACGGCGGAAAGAAAGAAAAGGTCGCTGTGTGTGGCAATGTGTGCGAGTCCGGCGATGTTTTTACAAGGGATGAGCACGGAATTGTTGACAGGAGCCTTCCCATTATTAAGGAGGGGGATGTTCTTGCAATCCTGGTGGCAGGCGCTTACGGGTTTTCAATGTCATCCAATTACAACACGAGGCCCAGGCCTGCCGAGGTGCTCGTCTCCGGCAGCGATGTCAGAGTCATAAGGAAGCGCGAAGACCTGGCTCATGTTATCTACGGCATGTAG
PROTEIN sequence
Length: 422
MISVKNNRLFIGEVAASGLARRFGTPLYAYDEEAIRSKVSALVQNIAYRPLRIFYAAKANTNLSVLKIIRDEGGQSIGIDAVSPGEIEIALKAGFKPEQVIFTSTSVTDDEMKFAISRKVLVNCDSLSQLERYGRLSPGSKVCFRVNPDVGAGHHGHVITGGPESKFGILAGDVGKAFAIASKYGLKIVGIHQHIGSGILETGKFLTAMKVLLSIIEKNKSGLGDLEFVDFGGGIGVPYRPGQKPINFAKFGAAVSKLFETFCSSFGKKLSLTIEPGRFIVAESGALLCTVNTIKQTPKHKFVGVDTGFHHLIRPMAYGSYHPIVVVDNCGNGGKKEKVAVCGNVCESGDVFTRDEHGIVDRSLPIIKEGDVLAILVAGAYGFSMSSNYNTRPRPAEVLVSGSDVRVIRKREDLAHVIYGM*