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Ig9238_scaffold_5695

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Displaying items 31-60 of 65 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_5695_31
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24091..24327)
DNA (237bp) protein (79aa)
50S ribosomal protein L28 Tax=Thiomonas RepID=D5X4V3_THIK1
rpmB; 50S ribosomal protein L28
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
Ig9238_scaffold_5695_32
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24431..25105)
DNA (675bp) protein (225aa)
DNA repair protein RadC Tax=Sulfuricella denitrificans skB26 RepID=S6B1P0_9PROT
radC; DNA repair protein RadC
Uncharacterized protein {ECO:0000313|EMBL:GAO34987.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Ig9238_scaffold_5695_33
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25137..26366
DNA (1230bp) protein (410aa)
phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase Tax=Sulfuricella denitrificans skB26 RepID=S6AFD4_9PROT
Tax=BJP_S1_SUB10_Methylophilales_55_32
Ig9238_scaffold_5695_34
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26410..26925
DNA (516bp) protein (172aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
deoxyuridine 5''''-triphosphate nucleotidohydrolase Tax=Burkholderia sp. JPY251 RepID=UPI00036C604D
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Ig9238_scaffold_5695_35
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26934..27299
DNA (366bp) protein (122aa)
Cobalamin (Vitamin B12) biosynthesis CbiX protein Tax=mine drainage metagenome RepID=T0ZZP6_9ZZZZ
cbiX; CbiX
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_5695_36
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27324..27626)
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82Y37_NITEU
Uncharacterized protein {ECO:0000313|EMBL:AKH37049.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
hypothetical protein
Ig9238_scaffold_5695_37
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27678..28166
DNA (489bp) protein (163aa)
Putative uncharacterized protein Tax=Methyloversatilis universalis FAM5 RepID=F5RC68_9RHOO
Signal peptide protein {ECO:0000313|EMBL:KIF81323.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
Ig9238_scaffold_5695_38
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28259..28738
DNA (480bp) protein (160aa)
Cytochrome c, class II Tax=Acidovorax sp. (strain JS42) RepID=A1W2S0_ACISJ
class II cytochrome c
Cytochrome c, class II {ECO:0000313|EMBL:ABM40545.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Ig9238_scaffold_5695_39
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28739..29434)
DNA (696bp) protein (232aa)
hypothetical protein Tax=Uliginosibacterium gangwonense RepID=UPI00036EEB4D
cytochrome B561
Cytochrome B561 {ECO:0000313|EMBL:ACV35806.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Ig9238_scaffold_5695_40
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29454..29957)
DNA (504bp) protein (168aa)
hypothetical protein bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_5695_41
unknown

Not on your lists

comp(29960..30058)
DNA (99bp) protein (33aa)

This feature has no annotations

Ig9238_scaffold_5695_42
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30254..31273
DNA (1020bp) protein (340aa)
Putative homoserine kinase type II (Protein kinase fold) Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QQ06_AZOSU
putative homoserine kinase type II (protein kinase fold)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Ig9238_scaffold_5695_43
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31275..32231)
DNA (957bp) protein (319aa)
Transcriptional regulator, LysR family Tax=Dechloromonas aromatica (strain RCB) RepID=Q47C92_DECAR
LysR family transcriptional regulator
Tax=BJP_IG2103_Dechloromonas_60_92
Ig9238_scaffold_5695_44
unknown

Not on your lists

32376..32561
DNA (186bp) protein (62aa)

This feature has no annotations

Ig9238_scaffold_5695_45
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32771..33172
DNA (402bp) protein (134aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI00037E1D85
UPF0502 protein OYT1_00862 {ECO:0000256|HAMAP-Rule:MF_01584}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
hypothetical protein
Ig9238_scaffold_5695_46
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33239..33505
DNA (267bp) protein (89aa)
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_5695_47
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33513..34478
DNA (966bp) protein (322aa)
Magnesium and cobalt transport protein CorA Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBH1_ANADF
magnesium and cobalt transport protein CorA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Ig9238_scaffold_5695_48
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34486..35193
DNA (708bp) protein (236aa)
Uncharacterized protein Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AR91_PSERE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN46471.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
Ig9238_scaffold_5695_49
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35194..38556)
DNA (3363bp) protein (1121aa)
ATP-dependent DNA helicase pcrA Tax=Nitrosospira sp. APG3 RepID=M5DI70_9PROT
UvrD/REP helicase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_5695_50
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38553..41333)
DNA (2781bp) protein (927aa)
Uncharacterized protein Tax=Nitrosospira sp. APG3 RepID=M5DJW7_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Ig9238_scaffold_5695_51
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41374..41658)
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=gamma proteobacterium BDW918 RepID=I2JM75_9GAMM
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
Ig9238_scaffold_5695_52
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41780..41998
DNA (219bp) protein (73aa)
hypothetical protein Tax=Methylovulum miyakonense RepID=UPI0003644AD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV27769.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Ig9238_scaffold_5695_53
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42009..42452
DNA (444bp) protein (148aa)
Thioredoxin Tax=Acidovorax sp. KKS102 RepID=K0HXZ7_9BURK
thioredoxin
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_5695_54
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42463..43527
DNA (1065bp) protein (355aa)
Secretion protein HlyD Tax=Sulfuricella denitrificans skB26 RepID=S6AJH4_9PROT
secretion protein HlyD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_5695_55
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43537..46740
DNA (3204bp) protein (1068aa)
Acriflavin resistance protein Tax=Sulfuricella denitrificans skB26 RepID=S6AB32_9PROT
acriflavin resistance protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Ig9238_scaffold_5695_56
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46835..48181
DNA (1347bp) protein (449aa)
Quinol oxidase, subunit I Tax=Vibrio cholerae MZO-2 RepID=A6A0B7_VIBCL
bacterial Cytochrome Ubiquinol Oxidase family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_5695_57
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48192..49178
DNA (987bp) protein (329aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI0003817D9A
cytochrome bd ubiquinol oxidase subunit II
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Ig9238_scaffold_5695_58
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49209..49532)
DNA (324bp) protein (108aa)
Putative uncharacterized protein Tax=uncultured bacterium CSL11 RepID=G4WVC7_9BACT
fdxA; 7Fe ferredoxin
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Ig9238_scaffold_5695_59
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49740..49985
DNA (246bp) protein (82aa)
Thioredoxin Tax=Sulfuricella denitrificans skB26 RepID=S6ABD0_9PROT
thioredoxin
Tax=CG_Beta_01
Ig9238_scaffold_5695_60

Not on your lists

50169..51422
DNA (1254bp) protein (418aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; species="Bacteria; environmental samples.;" source="uncultured bacterium CSL11.;"
Transcription termination factor Rho Tax=uncultured bacterium CSL11 RepID=G4WVC9_9BACT
rho; transcription termination factor Rho
Displaying items 31-60 of 65 in total

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