ggKbase home page

L1_007_000G1_scaffold_388_20

Organism: L1_007_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: comp(23244..24755)

Top 3 Functional Annotations

Value Algorithm Source
Lincomycin resistance protein LmrB n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XX29_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 503.0
  • Bit_score: 964
  • Evalue 3.70e-278
Transport protein {ECO:0000313|EMBL:BAR01557.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 503.0
  • Bit_score: 964
  • Evalue 5.20e-278
major facilitator transporter similarity KEGG
DB: KEGG
  • Identity: 97.7
  • Coverage: 479.0
  • Bit_score: 906
  • Evalue 2.60e-261

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium catenulatum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1512
ATGCAAGAACGGAATACAACGCTCGAAACCACCAGCCATATCAGTCGAAACAGTAACGAAAACGTCAGGAAAATGCCGGACGAACGCATTCCCGGCAAGCTCATTGGAGCCATCGTGGCGGTCGGCTCCCTCGCCTTCATCGGCATTCTCACCGAAACCGTGATGACGGTGCTCTTCCCGCAACTCATGCGGGAATTCAACGTCGACACCGCAACCGTGCAATGGATCACCACCATCTACCTGCTGGTGGTCGCGGCCACCATGCCGTTGTCGTCATACCTCAACCGTCGTTTCAAGCACCGCACGTTGTTCCTTGCCGCGGTGGCGCTTGCCGTGCTTGGCTCGCTCATTATGATCGTCGGTCATGCGTTCCCGGTCATTCTCATTGCCCGTGTGATTCAGGGCATGGGTTCCGGTGTGGCCACGCCGTTGATGATCAACATCATTCTTGAACAGTCGCCAAAGAGCAAAATCGGTCGTTTGATGGGCGTCGGTTCGCTGGTCATCACCGTCGCTCCGGCAATTGGTCCGACCGTCGGTGGCGCGGTGTCGAGCATTCTGCCATGGCGTGCGATTTTCGTGATCGTCATTCCGATTGTTCTGCTGATTTCGTTGCCGGTCGGTTTAAAATGCATCGAACAGCATCGCCCGACGGAAGAGGCACGTCTCAATTCGTTGCAGTTCGTGTCGATTGTGCTTGCATTGTGTGGATTGGTGATGTTCCTAAATCAAGCTGGAGTGTCCGTCAGCGCCGCGGTTTCCGGTAGCAGCGCCATGGTGTCGGCAGTGTTCGCCGTGGTGAGTCTGATCGTTGGGTTGGGAGCATTGCTGTTTTTTGGCTGGTCGTCGAAGCGTTCGTTCTCGCCGCTGATCCGTTTGGGCTGGCTGCATGACCCGATGGTGTTGCTGCATTTGATCGCCTATATGTTGCTGCCGATCGTCGGCATCGGTTTCGGTTATGTGATTACCAATGTGGCGCAGCTTTCGTTGGGAGCCAGCGCGTTCCTGTCCGGCGCGTTGGTGCTGCCGGGTGCGTTGATCGGCGCGTTTTTCGCACCGGTTGGAGGTATGCTGTATGACCGTTTCGGACCGGTGCGTCCGATTCTCGGTGCGTTTTTCGCCGCGATTTGCGGGCCGATTCTGCTGCTGGTATTTTCCATGCGACTGACACCCGTCATGCTTGCCGGTTTCTACTTTATTTTCGGACTTGGCTATTCGCTTGGTTTTTCCAATATCATGACCAATGCGTTACGCAATATCGCGCCTCAGTTCATGCCGGACGGCAATGCGGTGTTCAACACCTGCCTGCAGTTTGGTGGTGCCGCCGGTACAGCGCTCTTTTCCACGATTCTGTCGGTGGCCCAGGCCGGTTCAGGCGAAGAGGGCAGTGATGCGTTCCGTCATGCCACGGCGGTTGGCGGAAGTTGGACGTTCGCCATGATGATTGCCATCGTCTCTATAGCCATCTGCTGCCTGATTGCGGCGTTCCGAATCGGCGCAAAACGTAAATAA
PROTEIN sequence
Length: 504
MQERNTTLETTSHISRNSNENVRKMPDERIPGKLIGAIVAVGSLAFIGILTETVMTVLFPQLMREFNVDTATVQWITTIYLLVVAATMPLSSYLNRRFKHRTLFLAAVALAVLGSLIMIVGHAFPVILIARVIQGMGSGVATPLMINIILEQSPKSKIGRLMGVGSLVITVAPAIGPTVGGAVSSILPWRAIFVIVIPIVLLISLPVGLKCIEQHRPTEEARLNSLQFVSIVLALCGLVMFLNQAGVSVSAAVSGSSAMVSAVFAVVSLIVGLGALLFFGWSSKRSFSPLIRLGWLHDPMVLLHLIAYMLLPIVGIGFGYVITNVAQLSLGASAFLSGALVLPGALIGAFFAPVGGMLYDRFGPVRPILGAFFAAICGPILLLVFSMRLTPVMLAGFYFIFGLGYSLGFSNIMTNALRNIAPQFMPDGNAVFNTCLQFGGAAGTALFSTILSVAQAGSGEEGSDAFRHATAVGGSWTFAMMIAIVSIAICCLIAAFRIGAKRK*