ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

L1_007_000G1_scaffold_8856_4

Organism: L1_007_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: comp(1920..3431)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR system CASCADE complex protein CasA n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QND2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 503.0
  • Bit_score: 1037
  • Evalue 0.0
CRISPR system CASCADE complex protein CasA {ECO:0000313|EMBL:EGG50904.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 503.0
  • Bit_score: 1037
  • Evalue 0.0
CRISPR-associated protein similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 515.0
  • Bit_score: 556
  • Evalue 5.00e-156

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parasutterella excrementihominis → Parasutterella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1512
TTGACGCAAATATCACTAATATCAGAGCAATGGATACCGGTCCGAGACAGGAAAGGTGTCGTCAGAAAAATCTCACCTCTTGAAATATTAGACGAAGAGATTGTGGACATTGCGGCTGAGAGGGCCGATTTTCAAACAGCACTGTGGCAGTTTTTAATTGGCCTCATCCAAACAACCCTGGCGCCGGAGGATGAAGACGCGTGGTTTGATATCTGGGAAGAAGGATTAGAAAAAGCGGATCTAGCTAAGGCATTTTCTAAGGTCGGGCCGGCGTTTATTTTTGGTCCCCAGAGCCCTTCATTCATGCAGGATTTTGACCAGCTGGAAGGAGAAGCGGTTCCTCTGGCCGCGCTTCTTCCGGAATCTCCGGGTGAGAACACCATAAAACATAATAAAGACTTTTTTATTAAGCGCGGAGAAAAAAGATTTTGTCCTCATTGTGCAGCAATGGCTCTATTTTCTTTGCAGTTAAATGCTCCCTCTGGAGGACAAGGGTATCGTACCGGCCTTCGCGGAGGCGGTCCGCTTACCACTCTAATTGAACTTCACAGTTACAAAGGCGACCGAAATGTTCCTCTTTGGCGCAAGTTATGGGCCAATGTTATGCCGGAGTTTGAGTCGAATCTGCCCGTACCTAAAGAATTTGATGCGGCGGTTTTTCCTTGGATGGGAAAAACAAGGACCAGCAAAGCTAAAGGGAGCGAGACGACTCCGGAACAAGTTAATCCTCTTCAGGCATACTGGGGAATGCCTCGCCGAGTACGGATCGATTTTGAGGATCTGGAAGAAGGGAGGTGTGATTTTTGCGGAGAAGAAAGTGATCAGCTGCTTTCAAAAATGAAAGTACAAAACTACGGGATCAACTATTCTGGTTGGGTTCATCCCCTGACACCCTACAGATGTAAGTTAAAAACTCCCGGAGAGTTAAATTCCGTAAAGCTTCAGCCGGGCGGCTTGGTTTGGAAGGATTGGCTCGGTTTAAATGAGGAAACAACCCGCAAGGATACAAAAGAAATTCCTGCGCTGGTTGTGGAAACTTTCAAACATCACATTGGTACTGAAACAAAACACGGCCTTTGGGGATTCGGGTACGACTTCGACAACATGAAAGTACGATGCTGGTATGAGCATCATCTTCCCCAATTATTGTCAAAAGAAATGCAGTCTTCCTTACAGGTTGCTCAAGACAAAGCTGCACGGACTCTTCTTGGGCTGAAAAGAGCATTCAGTAAATTAAATCGTGAGTGTTCTTATTTGGACGTTGAGTTTTGGAATCTTACTCAAAATCTGTTTTTAGGTTTGATTAGGGAACTAGACGAGAAAAACTCCGACTCAGAATCACTCAGCGCTTTTATAAAAAACATAAATCGATTTGCACTGATTTTTTTTGATGACAGAACTTTTTCCTCTCAGATGAATCCAAAAGATTACAAAGAGTGTTCGGAAGCAAGAAAAAATTTATTGGCGAGTCTTTATGCCAAATCAAGATCTACTCCTAAGGAGGCGAAATGA
PROTEIN sequence
Length: 504
LTQISLISEQWIPVRDRKGVVRKISPLEILDEEIVDIAAERADFQTALWQFLIGLIQTTLAPEDEDAWFDIWEEGLEKADLAKAFSKVGPAFIFGPQSPSFMQDFDQLEGEAVPLAALLPESPGENTIKHNKDFFIKRGEKRFCPHCAAMALFSLQLNAPSGGQGYRTGLRGGGPLTTLIELHSYKGDRNVPLWRKLWANVMPEFESNLPVPKEFDAAVFPWMGKTRTSKAKGSETTPEQVNPLQAYWGMPRRVRIDFEDLEEGRCDFCGEESDQLLSKMKVQNYGINYSGWVHPLTPYRCKLKTPGELNSVKLQPGGLVWKDWLGLNEETTRKDTKEIPALVVETFKHHIGTETKHGLWGFGYDFDNMKVRCWYEHHLPQLLSKEMQSSLQVAQDKAARTLLGLKRAFSKLNRECSYLDVEFWNLTQNLFLGLIRELDEKNSDSESLSAFIKNINRFALIFFDDRTFSSQMNPKDYKECSEARKNLLASLYAKSRSTPKEAK*