ggKbase home page

L1_007_000G1_scaffold_1278_12

Organism: dasL1_007_000G1_concoct_30_fa

near complete RP 49 / 55 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(6700..7239)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBA5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 179.0
  • Bit_score: 306
  • Evalue 1.50e-80
Uncharacterized protein {ECO:0000313|EMBL:KGF55594.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 179.0
  • Bit_score: 307
  • Evalue 9.30e-81
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 176.0
  • Bit_score: 103
  • Evalue 5.40e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavonifractor plautii → Flavonifractor → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 540
ATGTTGTGTGAAGTACCGTTGACAAAGGAGCAGCAGGATTTTGCCGCTGAACATCATGGCCTGGTCTATAAATTTCTCAATGACAACCATCTTCCAGAGGATGAGTTCTATGATGTGGTTATCTTTGGTTACTTAAAGGCTGTCCAAGACTATTTTTCAAGGGAAATGTTGCGACAATATTCTTTTTCGACGATTGCTTGGAAAATAATGTATCGCAATCTGTCGAACTATTATCTAAGTCAAACACGCTGCAAGCGTAATGCAGAAGTCATCAGCATCCATCTGGGCCTATACCCGGATGGCGTTCCGCTGGAAGAGGTGCTGCCGGGTCAGGACCGTCTCATGCAGGAATTTGAAATGCAGCAGATGCTCCATGATCTGGCTTCCCATGTTTCTGAACAACAGATGAAAATTGTCCGCATGAAGGGTTACGGCTATGGAATCAGGGAGATTTCCAGCCACGAAAAAATACCGATGAAGCGCATCCAGGAACTTCTTGAGGAGGTCCATACTGTGTTTTTGAGGTTATGCCGCGAGTAG
PROTEIN sequence
Length: 180
MLCEVPLTKEQQDFAAEHHGLVYKFLNDNHLPEDEFYDVVIFGYLKAVQDYFSREMLRQYSFSTIAWKIMYRNLSNYYLSQTRCKRNAEVISIHLGLYPDGVPLEEVLPGQDRLMQEFEMQQMLHDLASHVSEQQMKIVRMKGYGYGIREISSHEKIPMKRIQELLEEVHTVFLRLCRE*