ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

L1_007_000G1_scaffold_1216_27

Organism: dasL1_007_000G1_concoct_30_fa

near complete RP 49 / 55 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(22197..23177)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVD1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 311.0
  • Bit_score: 518
  • Evalue 4.50e-144
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDM99900.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 311.0
  • Bit_score: 518
  • Evalue 6.30e-144
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 317.0
  • Bit_score: 387
  • Evalue 2.00e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudoflavonifractor capillosus → Pseudoflavonifractor → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 981
ATGTATAGCTGCAATGTATTGGATGAGCAATATGCCGGGGCCATGGCGGAGCATGGCTTTGTGCCGGAGCCGGACAACCGGAGGTATGGAAGCATGGGCCTGTGCTGGCGGCAGGCCGGCACCGGTGGAAGCGGCTATTTCTGGACCTATGGGCAGCAGGACCTCTATATGCTCAAAATCCACGATTTCTATTTTCATGAGGATCAGCTTCTGGAGTTTTGCTGGCCGGAGAGCCTGAGCGTCACCTGGTATGAGTCCATCTCCGGGGAGGAGTTCTCTCCCTGCCGCCGGCTGGTGTCCGGCTGTGTCAAGAGCTTCATCGGCGGGCGGGAGCCCTACCGGGCGCTCATCCACCGCCGGGTCCCCATCGTATCCATCGGCATTGAGATCACTCCGGCCTACTATCAGGACTACCTCCGCCGCCAGTTTCCGGAGGAGTTCCAAAGCCTGTTGGAGTCCTTTCAGTCTCTGGACCAGACCGACCACTTCCCTGAGATGGTCCGCCTGCTGAAAGAGGTCCGGGACTACCGGGGCGAGGGGCTGGCCGCCAAGCTCTTTTACGACGGCAAGGTGGCGGAAGCCGTGGCGCTGGTGGTGGAACGGCACCGGGCCCACCCAGCTCCCAGGCGGACACTGACGCAGGAGGATGAGCGGATGCTGGCGGATGTGGCGGCCTACATCACCGCCCATTGCGCGGACCGGCTGCCTCTGGAGCGCCTGGCCCGCATCGGCTGCATGGGCGTCTCCAAGCTGAAGGACGCCTTTCACGCCCGATACGGCTGCACCATCACTCAGTATATTCAGGGGCAGCGGATGGAGCGTGCGGAGCAGCTGCTGGTGAATACCGACCTGCCCGTGGGTCAGATCGCTCAAATTGTGGGCTATCAGAATCCCAGCCGTTTCGCGCAGCTCTTCCGCCGCAGCACCGGGCAGAGCCCGGCAGCGTTCCGGGCGTTCTCCCACCCAGGGGAAGCAGAGTGA
PROTEIN sequence
Length: 327
MYSCNVLDEQYAGAMAEHGFVPEPDNRRYGSMGLCWRQAGTGGSGYFWTYGQQDLYMLKIHDFYFHEDQLLEFCWPESLSVTWYESISGEEFSPCRRLVSGCVKSFIGGREPYRALIHRRVPIVSIGIEITPAYYQDYLRRQFPEEFQSLLESFQSLDQTDHFPEMVRLLKEVRDYRGEGLAAKLFYDGKVAEAVALVVERHRAHPAPRRTLTQEDERMLADVAAYITAHCADRLPLERLARIGCMGVSKLKDAFHARYGCTITQYIQGQRMERAEQLLVNTDLPVGQIAQIVGYQNPSRFAQLFRRSTGQSPAAFRAFSHPGEAE*