ggKbase home page

L1_007_000M1_scaffold_50

Search features with annotation key words

Displaying items 121-150 of 160 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_50_121
unknown

Not on your lists

comp(137444..137947)
DNA (504bp) protein (168aa)

This feature has no annotations

L1_007_000M1_scaffold_50_122
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(137950..138438)
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X566_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04672.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
L1_007_000M1_scaffold_50_123
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(138443..138958)
DNA (516bp) protein (172aa)
Conserved domain protein n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PDW0_9BACE
Conserved domain protein {ECO:0000313|EMBL:EGF54939.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
hypothetical protein
L1_007_000M1_scaffold_50_124
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(139086..140438)
DNA (1353bp) protein (451aa)
Phage terminase, large subunit, PBSX family n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PDV9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB55318.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
hypothetical protein
L1_007_000M1_scaffold_50_125
unknown

Not on your lists

comp(140442..141086)
DNA (645bp) protein (215aa)

This feature has no annotations

L1_007_000M1_scaffold_50_126
Erwinia sp. Ejp617, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141093..141944)
DNA (852bp) protein (284aa)
Uncharacterized protein n=14 Tax=Escherichia coli RepID=T7YGR5_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP12348.1}; TaxID=215689 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia sp. (strain Ejp617).;"
L1_007_000M1_scaffold_50_127
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141934..142866)
DNA (933bp) protein (311aa)
Putative transcriptional regulator n=1 Tax=Escherichia coli ECC-Z RepID=V6MS77_ECOLX
Transcriptional regulator {ECO:0000313|EMBL:KAJ96834.1}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolytica (Klebsiella ornithinolytica).;"
putative transcriptional regulator
L1_007_000M1_scaffold_50_128
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142964..143188)
DNA (225bp) protein (75aa)
Protein translocase subunit SecA n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RVI5_ALLVD
preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
L1_007_000M1_scaffold_50_129
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(143421..144077)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MWV4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03396.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L1_007_000M1_scaffold_50_130
unknown

Not on your lists

comp(144074..144454)
DNA (381bp) protein (127aa)

This feature has no annotations

L1_007_000M1_scaffold_50_131
unknown

Not on your lists

comp(144432..144941)
DNA (510bp) protein (170aa)

This feature has no annotations

L1_007_000M1_scaffold_50_132
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(144938..145435)
DNA (498bp) protein (166aa)
VRR-NUC domain n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IIW1_9BACT
VRR-NUC domain.
VRR-NUC domain {ECO:0000313|EMBL:CBK62873.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L1_007_000M1_scaffold_50_133
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(145438..145986)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJL0_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77178.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_007_000M1_scaffold_50_134
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(145999..146769)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98277.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
L1_007_000M1_scaffold_50_135
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(146766..147047)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YHX4_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76592.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_007_000M1_scaffold_50_136
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(147031..147327)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XKF8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24093.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L1_007_000M1_scaffold_50_137
unknown

Not on your lists

comp(147366..147716)
DNA (351bp) protein (117aa)

This feature has no annotations

L1_007_000M1_scaffold_50_138

Not on your lists

comp(147732..148784)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Vibrio phage jenny 12G5 RepID=R9U9G0_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:AGN51427.1}; TaxID=573176 species="Viruses; unclassified phages.;" source="Vibrio phage jenny 12G5.;"
hypothetical protein
L1_007_000M1_scaffold_50_139
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(148803..149552)
DNA (750bp) protein (250aa)
Metallo-beta-lactamase domain-containing protein id=2918853 bin=GWF2_Bacteroidetes_40_14 species=Bacteroides fragilis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_40_14_curated
L1_007_000M1_scaffold_50_140
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(149557..150540)
DNA (984bp) protein (328aa)
Phage-like protein n=1 Tax=Clostridium botulinum Af84 RepID=S8DAM3_CLOBO
recombinational DNA repair protein (RecE pathway)
Recombinational DNA repair protein (RecE pathway) {ECO:0000313|EMBL:AGK97375.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L1_007_000M1_scaffold_50_141
Prevotella disiens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(150543..150812)
DNA (270bp) protein (90aa)
Lysine-specific demethylase 2A n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I9EKN7_9BACE
Demethylase {ECO:0000313|EMBL:KGF48766.1}; TaxID=1401075 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella disiens DNF00882.;"
demethylase
L1_007_000M1_scaffold_50_142
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(150817..152886)
DNA (2070bp) protein (690aa)
Uncharacterized protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2CKT2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:ERI85150.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes F0041.;"
hypothetical protein
L1_007_000M1_scaffold_50_143
unknown

Not on your lists

comp(152916..153077)
DNA (162bp) protein (54aa)

This feature has no annotations

L1_007_000M1_scaffold_50_144
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(153080..153298)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JGY6_9BACE
ribosomal large subunit pseudouridine synthase B
Uncharacterized protein {ECO:0000313|EMBL:EDV01730.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
L1_007_000M1_scaffold_50_145
unknown

Not on your lists

comp(153396..153701)
DNA (306bp) protein (102aa)

This feature has no annotations

L1_007_000M1_scaffold_50_146
unknown

Not on your lists

comp(153703..153909)
DNA (207bp) protein (69aa)

This feature has no annotations

L1_007_000M1_scaffold_50_147
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(153978..154436)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5WC71_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ97724.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L1_007_000M1_scaffold_50_148
unknown

Not on your lists

comp(154433..154756)
DNA (324bp) protein (108aa)

This feature has no annotations

L1_007_000M1_scaffold_50_149

Not on your lists

comp(154876..155271)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9C7I9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJW95820.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
L1_007_000M1_scaffold_50_150
Alistipes sp. CAG:831, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

155406..156059
DNA (654bp) protein (218aa)
Phage repressor n=1 Tax=Alistipes sp. CAG:831 RepID=R5I2Y1_9BACT
Phage repressor {ECO:0000313|EMBL:CCY36335.1}; TaxID=1262698 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:831.;"
hypothetical protein
Displaying items 121-150 of 160 in total

View Taxonomy