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L1_007_000M1_scaffold_53

Search features with annotation key words

Displaying items 61-90 of 186 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_53_61
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(80283..81278)
DNA (996bp) protein (332aa)
ATPase family associated with various cellular activities (AAA) n=7 Tax=Bacteroides RepID=A7V342_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY80975.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
ATPase AAA
L1_007_000M1_scaffold_53_62
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(81472..82653)
DNA (1182bp) protein (394aa)
DNA-binding protein HU n=6 Tax=Bacteroides RepID=A7V341_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE02805.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
integration host factor IHF subunit alpha
L1_007_000M1_scaffold_53_63
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(82681..82953)
DNA (273bp) protein (91aa)
DNA-binding protein HU n=7 Tax=Bacteroides RepID=A7V340_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY80973.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
histone family protein DNA-binding protein
L1_007_000M1_scaffold_53_64
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(83032..84330)
DNA (1299bp) protein (433aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
30S ribosomal protein S12 (EC:2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=5 Tax=Bacteroides RepID=E5VBZ4_9BACE
L1_007_000M1_scaffold_53_65
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(84327..85286)
DNA (960bp) protein (320aa)
Signal recognition particle receptor FtsY n=7 Tax=Bacteroides RepID=A7V338_BACUN
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
signal recognition particle-docking protein FtsY
L1_007_000M1_scaffold_53_66
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(85537..85695)
DNA (159bp) protein (53aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7V337_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV25631.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L1_007_000M1_scaffold_53_67
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(85710..85898)
DNA (189bp) protein (63aa)
50S ribosomal protein L33 n=70 Tax=Bacteroidales RepID=RL33_BACFN
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1235809 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes JCM 6292.;"
L1_007_000M1_scaffold_53_68
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(85919..86179)
DNA (261bp) protein (87aa)
50S ribosomal protein L28 n=15 Tax=Bacteroides RepID=A7V335_BACUN
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
50S ribosomal protein L28
L1_007_000M1_scaffold_53_69
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(86301..86768)
DNA (468bp) protein (156aa)
Competence-damaged protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VBY9_9BACE
Competence/damage-inducible CinA C-terminal domain protein {ECO:0000313|EMBL:KDS48751.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
CinA domain protein
L1_007_000M1_scaffold_53_70
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(86782..87804)
DNA (1023bp) protein (341aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=6 Tax=Bacteroides RepID=A7V333_BACUN
L1_007_000M1_scaffold_53_71
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

88009..92481
DNA (4473bp) protein (1491aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HT33_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS07162.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L1_007_000M1_scaffold_53_72
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(92639..94210)
DNA (1572bp) protein (524aa)
primary replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=2 Tax=Bacteroides RepID=E5VBY6_9BACE
Replicative DNA helicase {ECO:0000313|EMBL:EFV25625.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
L1_007_000M1_scaffold_53_73
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

94508..95341
DNA (834bp) protein (278aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HTI7_BACUN
L1_007_000M1_scaffold_53_74
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

95425..95919
DNA (495bp) protein (165aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A7V329_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFA18521.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L1_007_000M1_scaffold_53_75
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(95989..97155)
DNA (1167bp) protein (389aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
formate-dependent phosphoribosylglycinamide formyltransferase (EC:6.3.4.-)
Phosphoribosylglycinamide formyltransferase 2 n=6 Tax=root RepID=A7V328_BACUN
L1_007_000M1_scaffold_53_76
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(97294..98811)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7EK50_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE02791.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L1_007_000M1_scaffold_53_77
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

98917..101136
DNA (2220bp) protein (740aa)
RelA/SpoT family protein (EC:2.7.6.5)
RelA/SpoT family protein n=5 Tax=Bacteroides RepID=A7V325_BACUN
RelA/SpoT family protein {ECO:0000313|EMBL:EDO54492.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
L1_007_000M1_scaffold_53_78
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

101153..101524
DNA (372bp) protein (124aa)
undecaprenol kinase (EC:2.7.1.66)
Prokaryotic diacylglycerol kinase n=5 Tax=Bacteroides RepID=A7V324_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY80958.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L1_007_000M1_scaffold_53_79
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(101500..102450)
DNA (951bp) protein (317aa)
Transporter, major facilitator family protein n=2 Tax=Bacteroides RepID=D2F2D3_9BACE
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFA18516.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
major facilitator superfamily MFS_1
L1_007_000M1_scaffold_53_80
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(102458..103276)
DNA (819bp) protein (273aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=5 Tax=Bacteroides RepID=A7V322_BACUN
L1_007_000M1_scaffold_53_81
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(103356..104003)
DNA (648bp) protein (216aa)
HAD hydrolase, family IA, variant 3 n=3 Tax=Bacteroides RepID=A7V321_BACUN
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EDO54487.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
HAD-superfamily hydrolase, subfamily IA, variant 3
L1_007_000M1_scaffold_53_82
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

104122..105477
DNA (1356bp) protein (452aa)
MATE efflux family protein n=3 Tax=Bacteroides RepID=A7V320_BACUN
MATE efflux family protein {ECO:0000313|EMBL:EDO54486.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
MATE efflux family protein
L1_007_000M1_scaffold_53_83
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(105629..107932)
DNA (2304bp) protein (768aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VBX3_9BACE
FtsX-like permease family protein {ECO:0000313|EMBL:KDS48766.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
putative ABC transport system, membrane protein
L1_007_000M1_scaffold_53_84
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(107952..110255)
DNA (2304bp) protein (768aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VBX2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV25666.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
putative ABC transport system, membrane protein
L1_007_000M1_scaffold_53_85
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(110277..110960)
DNA (684bp) protein (228aa)
ABC transporter n=3 Tax=Bacteroides RepID=E5VBX1_9BACE
Putative bacteriocin export ABC transporter, lactococcin 972 group {ECO:0000313|EMBL:EFA18510.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
ABC transporter related protein
L1_007_000M1_scaffold_53_86
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(110986..113301)
DNA (2316bp) protein (772aa)
Efflux ABC transporter, permease protein n=2 Tax=Bacteroides RepID=A7V315_BACUN
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDE02778.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L1_007_000M1_scaffold_53_87
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

113586..114392
DNA (807bp) protein (269aa)
Ser/Thr phosphatase family protein n=1 Tax=Bacteroides sp. D20 RepID=D2F2C5_9BACE
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EFA18508.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
metallophosphoesterase
L1_007_000M1_scaffold_53_88
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

114367..115104
DNA (738bp) protein (246aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A7V312_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY80946.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L1_007_000M1_scaffold_53_89
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

115351..116721
DNA (1371bp) protein (457aa)
Sigma-54 interaction domain protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EMS8_9BACE
Sigma-54 interaction domain protein {ECO:0000313|EMBL:CDE02772.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
Fis family transcriptional regulator
L1_007_000M1_scaffold_53_90
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

116711..118018
DNA (1308bp) protein (436aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=root RepID=A7V309_BACUN
multi-sensor signal transduction histidine kinase
Displaying items 61-90 of 186 in total

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