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L1_007_000M1_scaffold_123

Search features with annotation key words

Displaying items 31-60 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_123_31
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(32975..34003)
DNA (1029bp) protein (343aa)
Sigma factor regulatory protein FecR/PupR family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZ58_9PORP
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CDD14570.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
anti-FecI sigma factor, FecR
L1_007_000M1_scaffold_123_32
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34044..34634)
DNA (591bp) protein (197aa)
RNA polymerase sigma-70 factor n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XE49_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDD14571.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L1_007_000M1_scaffold_123_33
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35078..35212)
DNA (135bp) protein (45aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZY27_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14572.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_123_34
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35408..37285
DNA (1878bp) protein (626aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7ALM6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14573.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_123_35
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37421..39733
DNA (2313bp) protein (771aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
UvrD/REP helicase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X627_9PORP
helicase
L1_007_000M1_scaffold_123_36
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40600..41766)
DNA (1167bp) protein (389aa)
Aminotransferase class I/II n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XE53_9PORP
Aminotransferase class I/II {ECO:0000313|EMBL:CDD14576.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cystathionine beta-lyase
L1_007_000M1_scaffold_123_37
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42077..42976)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y875_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14577.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_123_38
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43443..43682)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTD2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14578.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Carboxymuconolactone decarboxylase
L1_007_000M1_scaffold_123_39
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43690..44169)
DNA (480bp) protein (160aa)
Tat pathway signal sequence domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X630_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDD14579.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
NADPH-flavin oxidoreductase
L1_007_000M1_scaffold_123_40
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44339..45235
DNA (897bp) protein (299aa)
Transcriptional regulator, AraC family n=3 Tax=Parabacteroides RepID=A7ALN8_9PORP
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDN84284.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional regulator
L1_007_000M1_scaffold_123_41
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45253..46083
DNA (831bp) protein (277aa)
Transcriptional regulator AraC family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XE57_9PORP
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD14581.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
AraC family transcriptional regulator
L1_007_000M1_scaffold_123_42
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46456..48162)
DNA (1707bp) protein (569aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Phosphomethylpyrimidine synthase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTD7_9PORP
thiamine biosynthesis protein ThiC
L1_007_000M1_scaffold_123_43
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48184..48921)
DNA (738bp) protein (246aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Thiamine-phosphate synthase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X631_9PORP
thiamine-phosphate pyrophosphorylase
L1_007_000M1_scaffold_123_44
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48912..49511)
DNA (600bp) protein (200aa)
Thiamine monophosphate synthase/TENI n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZ71_9PORP
Thiamine monophosphate synthase/TENI {ECO:0000313|EMBL:CDD14585.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
thiamine phosphate pyrophosphorylase
L1_007_000M1_scaffold_123_45
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49508..50347)
DNA (840bp) protein (280aa)
Phosphomethylpyrimidine kinase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XE61_9PORP
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CDD14586.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
L1_007_000M1_scaffold_123_46
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

50784..53339
DNA (2556bp) protein (852aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7ALQ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14587.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_123_47
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(53446..54720)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7ALQ2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84298.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_123_48
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

54996..55532
DNA (537bp) protein (179aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7ALQ3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84299.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_123_49
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(55432..55719)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZ76_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14590.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_123_50
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

55952..56452
DNA (501bp) protein (167aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7ALQ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14591.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_123_51
unknown

Not on your lists

comp(56397..56642)
DNA (246bp) protein (82aa)

This feature has no annotations

L1_007_000M1_scaffold_123_52
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(56807..57043)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6C3F2_9PORP
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EKN16191.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hydrogenase expression/formation protein HypE
L1_007_000M1_scaffold_123_53
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

57326..59185
DNA (1860bp) protein (620aa)
Acylphosphatase n=2 Tax=Parabacteroides merdae RepID=A7ALR0_9PORP
Acylphosphatase {ECO:0000313|EMBL:EDN84306.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hydrogenase maturation factor
L1_007_000M1_scaffold_123_54
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

59282..59401
DNA (120bp) protein (40aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7ALR1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14594.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_123_55
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

59638..60210
DNA (573bp) protein (191aa)
Hydrogenase accessory protein HypB-like protein n=3 Tax=Parabacteroides RepID=A7ALR3_9PORP
Hydrogenase accessory protein HypB-like protein {ECO:0000313|EMBL:EDN84309.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hydrogenase nickel incorporation protein HypB
L1_007_000M1_scaffold_123_56
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

60290..62350
DNA (2061bp) protein (687aa)
CoA binding domain protein n=3 Tax=Parabacteroides RepID=A7ALR4_9PORP
CoA binding domain protein {ECO:0000313|EMBL:CDD14596.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
acetyl-CoA synthetase
L1_007_000M1_scaffold_123_57
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

62535..62678
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6C3E8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14597.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_123_58
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

62618..65338
DNA (2721bp) protein (907aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=2 Tax=Parabacteroides RepID=A7ALR5_9PORP
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CDD14598.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_123_59
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

65561..65953
DNA (393bp) protein (131aa)
LytTr DNA-binding domain protein n=4 Tax=Parabacteroides RepID=A7ALR7_9PORP
LytTr DNA-binding domain protein {ECO:0000313|EMBL:CDD14599.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_123_60
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

65950..66603
DNA (654bp) protein (218aa)
FHA domain protein n=3 Tax=Parabacteroides RepID=A7ALR8_9PORP
FHA domain protein {ECO:0000313|EMBL:CDD14600.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ABC transporter ATP-binding protein
Displaying items 31-60 of 106 in total

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