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L1_007_000M1_scaffold_210

Search features with annotation key words

Displaying items 31-60 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_210_31
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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33690..34733
DNA (1044bp) protein (348aa)
Replication initiation and membrane attachment protein DnaB/DnaD family n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RDB4_9FIRM
Replication initiation and membrane attachment protein DnaB/DnaD family {ECO:0000313|EMBL:CDC32487.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
primosome subunit DnaD
L1_007_000M1_scaffold_210_32
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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34748..35716
DNA (969bp) protein (323aa)
Putative DNA replication protein DnaC n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XUV9_9FIRM
Putative DNA replication protein DnaC {ECO:0000313|EMBL:CDA12596.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
AAA ATPase
L1_007_000M1_scaffold_210_33
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35751..36629
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q8K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32105.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L1_007_000M1_scaffold_210_34
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(36714..37763)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TSH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC72774.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
L1_007_000M1_scaffold_210_35
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(37767..39134)
DNA (1368bp) protein (456aa)
Putative efflux protein MATE family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I8K2_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDB41766.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
putative efflux protein, MATE family
L1_007_000M1_scaffold_210_36
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(39147..40067)
DNA (921bp) protein (307aa)
Esterase/lipase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FJT3_9CLOT
Esterase/lipase {ECO:0000313|EMBL:EMS69369.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
alpha/beta hydrolase
L1_007_000M1_scaffold_210_37
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40356..41462)
DNA (1107bp) protein (369aa)
Methionine synthase II (Cobalamin-independent) n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RFR4_9FIRM
Methionine synthase II (Cobalamin-independent) {ECO:0000313|EMBL:CDC33317.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Methionine synthase II (cobalamin-independent)
L1_007_000M1_scaffold_210_38
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41555..42460)
DNA (906bp) protein (302aa)
Transcriptional regulator CpsY n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XID8_9FIRM
Transcriptional regulator CpsY {ECO:0000313|EMBL:CDA12139.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
Transcriptional regulator
L1_007_000M1_scaffold_210_39
unknown

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42955..43317
DNA (363bp) protein (121aa)

This feature has no annotations

L1_007_000M1_scaffold_210_40
Fusobacterium sp. OBRC1, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(43505..46213)
DNA (2709bp) protein (903aa)
Uncharacterized protein n=1 Tax=Fusobacterium nucleatum CTI-7 RepID=U7TK95_FUSNU
PF10881 family protein {ECO:0000313|EMBL:EUB33213.1}; TaxID=1032505 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. OBRC1.;"
Uncharacterized conserved protein (DUF2075)./Protein of unknown function (DUF2726)./Viral (Superfamily 1) RNA helicase.
L1_007_000M1_scaffold_210_41
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46253..46714)
DNA (462bp) protein (154aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NS83_9FIRM
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:CDF15585.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
L1_007_000M1_scaffold_210_42
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46756..47808)
DNA (1053bp) protein (351aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QCR7_9FIRM
L1_007_000M1_scaffold_210_43
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47965..48705
DNA (741bp) protein (247aa)
FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits n=1 Tax=Clostridium sp. CAG:678 RepID=R5KJB9_9CLOT
FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits {ECO:0000313|EMBL:CCY66920.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L1_007_000M1_scaffold_210_44
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48721..49986
DNA (1266bp) protein (422aa)
FHA domain protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XWX1_9FIRM
FHA domain protein {ECO:0000313|EMBL:CDA13426.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
hypothetical protein
L1_007_000M1_scaffold_210_45
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49983..51374
DNA (1392bp) protein (464aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RDS8_9FIRM
putative penicillin-binding protein A
L1_007_000M1_scaffold_210_46
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51374..52615
DNA (1242bp) protein (414aa)
GTPase HflX n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QP71_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
GTP-binding protein HflX
L1_007_000M1_scaffold_210_47
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52647..53111
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QA29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32665.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_210_48
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53136..53855
DNA (720bp) protein (240aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
ribosomal small subunit pseudouridine synthase A (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:678 RepID=R5KJB3_9CLOT
L1_007_000M1_scaffold_210_49
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54058..55143
DNA (1086bp) protein (362aa)
Transcriptional regulator CdaR family n=1 Tax=Clostridium sp. CAG:217 RepID=R6IXN4_9CLOT
Transcriptional regulator CdaR family {ECO:0000313|EMBL:CDB51209.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
transcriptional regulator CdaR
L1_007_000M1_scaffold_210_50
unknown

Not on your lists

55267..55389
DNA (123bp) protein (41aa)

This feature has no annotations

L1_007_000M1_scaffold_210_51
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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comp(55559..55972)
DNA (414bp) protein (138aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BHC2_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDD65201.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
Predicted membrane protein
L1_007_000M1_scaffold_210_52
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(56096..56449)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026264F3
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
L1_007_000M1_scaffold_210_53
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56531..57811)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QND3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32396.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L1_007_000M1_scaffold_210_54
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57910..58506)
DNA (597bp) protein (199aa)
Accessory gene regulator B n=1 Tax=Clostridium sp. CAG:678 RepID=R5L235_9CLOT
Accessory gene regulator B {ECO:0000313|EMBL:CCY67092.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
AIP processing-secretion protein
L1_007_000M1_scaffold_210_55
unknown

Not on your lists

comp(58515..58655)
DNA (141bp) protein (47aa)

This feature has no annotations

L1_007_000M1_scaffold_210_56
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58900..59226
DNA (327bp) protein (109aa)
Predicted transcriptional regulators n=1 Tax=Clostridium sp. CAG:678 RepID=R5KIV8_9CLOT
Predicted transcriptional regulators {ECO:0000313|EMBL:CCY66693.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
transcriptional regulator
L1_007_000M1_scaffold_210_57
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59340..60047
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XE24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA13090.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
virR; response regulator, virR
L1_007_000M1_scaffold_210_58
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60063..61343
DNA (1281bp) protein (427aa)
Sensor histidine kinase putative VirS n=1 Tax=Clostridium sp. CAG:678 RepID=R5L1D0_9CLOT
Sensor histidine kinase putative VirS {ECO:0000313|EMBL:CCY67096.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L1_007_000M1_scaffold_210_59
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61606..62397)
DNA (792bp) protein (264aa)
4Fe-4S binding domain-containing protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5Y8Z0_9FIRM
4Fe-4S binding domain-containing protein {ECO:0000313|EMBL:CDA13062.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
RnfABCDGE type electron transport complex subunit B
L1_007_000M1_scaffold_210_60
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62416..62994)
DNA (579bp) protein (193aa)
Electron transport complex RnfABCDGE type A subunit n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QN06_9FIRM
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
electron transport complex, RnfABCDGE type, A subunit
Displaying items 31-60 of 83 in total

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