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L1_007_000M1_scaffold_332

Search features with annotation key words

Displaying items 31-59 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_332_31
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32625..33818)
DNA (1194bp) protein (398aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X3W3_9PORP
L1_007_000M1_scaffold_332_32
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34496..35377
DNA (882bp) protein (294aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Parabacteroides merdae RepID=A7AAW4_9PORP
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EDN88221.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
anti-FecI sigma factor, FecR
L1_007_000M1_scaffold_332_33
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35381..38083
DNA (2703bp) protein (901aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZA99_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08115.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
TonB-dependent receptor plug
L1_007_000M1_scaffold_332_34
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38101..39108
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y930_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14912.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_332_35
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39346..39924)
DNA (579bp) protein (193aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AAW1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14911.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_332_36
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39908..40030)
DNA (123bp) protein (41aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6BI17_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14910.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_332_37
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40123..41007
DNA (885bp) protein (295aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Glucose-1-phosphate thymidylyltransferase n=3 Tax=Parabacteroides RepID=A7AAV9_9PORP
glucose-1-phosphate thymidylyltransferase
L1_007_000M1_scaffold_332_38
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41000..42070
DNA (1071bp) protein (357aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
GDP-L-fucose synthase n=3 Tax=Parabacteroides RepID=A7AAV8_9PORP
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
L1_007_000M1_scaffold_332_39
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42129..43280
DNA (1152bp) protein (384aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
GDP-mannose 4,6-dehydratase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y924_9PORP
GDP-D-mannose dehydratase
L1_007_000M1_scaffold_332_40
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43391..44539
DNA (1149bp) protein (383aa)
OmpA family protein n=3 Tax=Parabacteroides RepID=A7AAV6_9PORP
OmpA family protein {ECO:0000313|EMBL:EDN88213.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
outer membrane protein OmpA
L1_007_000M1_scaffold_332_41
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44636..46033
DNA (1398bp) protein (466aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X025_9PORP
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:CDD14905.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyltransferase
L1_007_000M1_scaffold_332_42
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46084..46524
DNA (441bp) protein (147aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Putative Holliday junction resolvase n=3 Tax=Parabacteroides RepID=K5Z9P1_9PORP
Holliday junction resolvase-like protein
L1_007_000M1_scaffold_332_43
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46530..47087
DNA (558bp) protein (186aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=3 Tax=Parabacteroides RepID=A7AAV3_9PORP
L1_007_000M1_scaffold_332_44
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

47112..48659
DNA (1548bp) protein (516aa)
Carboxyl transferase domain protein n=3 Tax=Parabacteroides RepID=A7AAV2_9PORP
Carboxyl transferase domain protein {ECO:0000313|EMBL:EDN88209.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
acetyl-CoA carboxylase, carboxyltransferase component
L1_007_000M1_scaffold_332_45
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48684..49016
DNA (333bp) protein (111aa)
Biotin-requiring enzyme n=7 Tax=Parabacteroides RepID=A7AAV1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14901.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
pyruvate/oxaloacetate carboxyltransferase
L1_007_000M1_scaffold_332_46
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49154..51277
DNA (2124bp) protein (708aa)
Tetratricopeptide repeat protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X020_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDD14900.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_332_47
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

51634..51801
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X702_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14899.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_332_48
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

51880..52182
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WU82_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14898.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_332_49
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52300..52590)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6C4U3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14897.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_332_50
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53336..53761
DNA (426bp) protein (142aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AAU5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14896.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyl transferase family protein
L1_007_000M1_scaffold_332_51
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(53891..54253)
DNA (363bp) protein (121aa)
IS66 family element Orf2 protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X6Z6_9PORP
IS66 family element Orf2 protein {ECO:0000313|EMBL:CDD14894.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_332_52
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(54240..54614)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WU75_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14893.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_332_53
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(55008..55268)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y909_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14892.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_332_54
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(55288..56358)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XEY1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14891.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_332_55
unknown

Not on your lists

comp(56365..57402)
DNA (1038bp) protein (346aa)

This feature has no annotations

L1_007_000M1_scaffold_332_56
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57515..57988)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TEM7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY83752.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
glycosyl transferase family protein
L1_007_000M1_scaffold_332_57
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57996..58187)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AAU0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88197.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L1_007_000M1_scaffold_332_58
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(58227..59351)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZYD3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08433.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ABC transporter ATP-binding protein
L1_007_000M1_scaffold_332_59
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(59566..60021)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZCQ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13424.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Displaying items 31-59 of 59 in total

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