ggKbase home page

L1_007_000M1_scaffold_34_69

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: comp(77514..78083)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XLF2_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 189.0
  • Bit_score: 370
  • Evalue 5.20e-100
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EJZ64640.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 189.0
  • Bit_score: 370
  • Evalue 7.30e-100
RNA polymerase subunit sigma-70 similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 186.0
  • Bit_score: 166
  • Evalue 4.20e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Barnesiella intestinihominis → Barnesiella → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 570
ATGAATGAGGAGGAACTTGTATATCAATTAAAACAGGAATCTCAAGATGCATTTAATAGAATATATAATATGTATTCGGCTCGGTTATATGCATATTGTATGCAGTATGTTAAGTCGAGAGAAGATACCGAAGAAATTGTACAAGATGTATTTATTAAATTATGGATAAATAGACATAGTATTATACATGGCGAGCACCTCAGCGCTTTTATTTTTAAAATAGCAAAGAATCAGATTATCAATAGGTATAAATCACGAATTAATTCATATGTTTTTGAAGAATATGTGAATTATTATAATGAAGAACAATGTTCTGTGAGCGATACTTCAGCTATTGTGGAATATGACGATTTCTGTAAATCTCTGAAAAAGGCTATGAAAAATTTGTCTAGTACTCAGAGGGAAGTGATTGAGTGTGTCAAATTAAACCAGATGTCTGTTAAAGAGACGGCTGTAAAACTTAGACTTAAAGAACAAACCGTAAAGAATGCTCTTTCAGCCGGATTGAAGGTTTTAAAGGAAATATTGAAGAAAAGTCTTGTTTTAATTCTTTCCTTTGTGTTAAAATAA
PROTEIN sequence
Length: 190
MNEEELVYQLKQESQDAFNRIYNMYSARLYAYCMQYVKSREDTEEIVQDVFIKLWINRHSIIHGEHLSAFIFKIAKNQIINRYKSRINSYVFEEYVNYYNEEQCSVSDTSAIVEYDDFCKSLKKAMKNLSSTQREVIECVKLNQMSVKETAVKLRLKEQTVKNALSAGLKVLKEILKKSLVLILSFVLK*