ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

L1_007_000M1_scaffold_343_1

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: comp(2..2521)

Top 3 Functional Annotations

Value Algorithm Source
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides cellulosilyticus RepID=E2NFQ4_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 840.0
  • Bit_score: 1671
  • Evalue 0.0
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY39890.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 840.0
  • Bit_score: 1671
  • Evalue 0.0
collagen-binding protein similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 793.0
  • Bit_score: 1366
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bacteroides cellulosilyticus → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2520
ATGAATTACAGGAAAAAGGTCGTGTTAATGCTCGGGGTTTTGTCCTACCTCAATTTGGGAACTTTTTCTCAAGCTGCTCCCCTGACAGTGGATCATACTTCAGTAGCCGGTGTGCAGCAAGCCTCCAATGACAAGAAGACAATTAAGATTTCCGGTTCGGTCAGAGATGCGGCCGGTGAATCTATTATTGGTGCTACCATTTTAGAGAAAGGAACTTCAAACGGTGTCGTTTCCGATATGGACGGTAACTTTTCTATGACTGTGGCTGCTAATGGGATATTACACATCTCATATATAGGTTATGTAGACCAGGACATAGCGGTTGCAGGTAAGAGTCTTTTCAATATTCAGTTGCTTGAAGATACGGAAATGTTAGATGAAGTGGTTGTTATCGGTTACGGTACGGTGAAACGTCGTGACCTGACGGGAGCCATAGCTTCGGTAAAAGGAGATGAGGTTGCAGCCAATCCTGTATCCAACGTTGCACAGGCCTTGCAGGGACGTCTGCCGGGTGTGAACGTAGTGTCGCAGGACGGTCGTCCGGGAGCTACAATCTCGGTACGTGTTCGCGGAGGAGGGTCTATAACCCAGTCCAATGATCCGCTCTATGTAGTCGATGGATTTCCGGTAAGCAATATTGGCGATATACCGGCTTCGGAAATAGAATCTATCGATGTGTTGAAAGATGCGTCATCTACGGCTATTTACGGTGCACGCGGTGCAAACGGTGTAATCCTGGTTACCACTAAGAGCGCCAAGGAAGGTCAGATTAAGGTAAGCTATGATGGCTATGTACAGGTCAAAAATGTATCGAAGACGCTTGAGACGCTTTCGGCTCAGGAGTATATCCTTCATAACTGGAGCTATGCCGCATCCAGAGGAACTGCTAACCAGGATGCTGTTGAGAAATACTTCGGTCTGGGAAGTAAGTATGGCAACCACTATGCCGACTATGCCAATGTGAAAGCCCATGACTATACGGATGATGTACTGCGTACCGCACTGTCTCATAACCACAGTGTGAATGTTTCGGGCGGTACAGATAAAACGAAAGTGATATTTACACTCGGCTACGTTAACGATGAAGGAATCAAGATCAATTCGGACTACAACCGTCTGAATGCTTCTTTCAAGATTCGGCAGAAACTTGCCAAGACACTGGACTTGGATGTTGATTTCCGTTATACGGAGTCAAATCTGAATGGACGTGAGAATGTAACGAACGGTAAAGGTTCTAATGTGTCGGGAGCTTATCGCTATCGTCCCATTGACAATCCGTTGGGTGGTGTCTCTTATTCGGAAGTTGCCTCAGGCTTCAGTTTCGGTGTGGCTAATATCGACGACAAGCACAATCCGGTAGAATTGATCAATGATATCACGAATAAATCCTATTCCCGTTCATTGAGAGGATCGGCAGCTTTGTCATGGGAGATCATCAAGGGGCTTGTGGCCCGCAGTGAATTATCACTTACCCGCAGTTCATCGAAGAGTACTTATTATGAGAACGGATATACAAACGGAGATAAGCGTGCCACCCTTAACCGGGGCATGGGAGATGGATTGCGTTCGGTGAGCACTTTGAATTATAACTTCAATATCGGCAAGAACAATGTATTCTCGGCATTGCTGGGTAATGAAGTCCTGAAGTCGGATTCCGAATCGTCGCAAATCACGGGCCGTGGCTATCCTTCTACATTTGATTATGACACCACGATGGGATTGATCCATACGGCAACCACCTCTTTCTCTGCAACCAATTCTTATAGCGTGCCTGCCCGTACGGTTTCCTTCTTCGGACGTTTGAGTTACACTTTCATGGACCGTTATCTGTTCACCGGTACGTTCCGTGCCGATGGCTCTTCTAAGTTTGCGCCGGATAATCGTTGGGGATACTTTCCCGCAGGTGCTTTCGCATGGCGCCTTTCGGAAGAACCTTTCATGAACGGCACAAAAGATTGGCTTTCCAATCTGAAGCTTCGTTTGTCCTATGGTACTTCGGGCAGTGACAATATTAGTTCCAATCTGTGGCGTGAAACCTGGTCGAGCCTTGGTTCGGGCAGCAATCATACCCCTATCAACGGTGAACTCGGTTCATTCTATCGTCCGGACGGTTTGCTGGCTAACTCTAAGCTGAAATGGGAAACTACTATTTCGCGCAACTTCGGTATTGACTTTGGATTCCTGAACAACCGTGTTAACGGTAGTCTGGAAGTATACTGGAATACTACAAAAGACTTGTTGATGGCCGTACCTGTGGATAACACTACCGGATACTCTTACCAGTTCCAGAACTTCGGTAAAACATCCAATCGTGGTATTGAGCTTTCGGTGAATGTAGATGTGATAAACAAAGGTGATTTCCGTTTTAACGTAGGTGCCATCTATAACTACAACCGCAATAAACTGGATGAACTGCCTAATGCCGACCAGTATCTCTATTCTTCATACTGGGGTTCTTCCTCTCTGGTTCCTACCAACGACTATATGTTTGTGGAAGGGAAAGCGATCGGCCTGGTACGT
PROTEIN sequence
Length: 840
MNYRKKVVLMLGVLSYLNLGTFSQAAPLTVDHTSVAGVQQASNDKKTIKISGSVRDAAGESIIGATILEKGTSNGVVSDMDGNFSMTVAANGILHISYIGYVDQDIAVAGKSLFNIQLLEDTEMLDEVVVIGYGTVKRRDLTGAIASVKGDEVAANPVSNVAQALQGRLPGVNVVSQDGRPGATISVRVRGGGSITQSNDPLYVVDGFPVSNIGDIPASEIESIDVLKDASSTAIYGARGANGVILVTTKSAKEGQIKVSYDGYVQVKNVSKTLETLSAQEYILHNWSYAASRGTANQDAVEKYFGLGSKYGNHYADYANVKAHDYTDDVLRTALSHNHSVNVSGGTDKTKVIFTLGYVNDEGIKINSDYNRLNASFKIRQKLAKTLDLDVDFRYTESNLNGRENVTNGKGSNVSGAYRYRPIDNPLGGVSYSEVASGFSFGVANIDDKHNPVELINDITNKSYSRSLRGSAALSWEIIKGLVARSELSLTRSSSKSTYYENGYTNGDKRATLNRGMGDGLRSVSTLNYNFNIGKNNVFSALLGNEVLKSDSESSQITGRGYPSTFDYDTTMGLIHTATTSFSATNSYSVPARTVSFFGRLSYTFMDRYLFTGTFRADGSSKFAPDNRWGYFPAGAFAWRLSEEPFMNGTKDWLSNLKLRLSYGTSGSDNISSNLWRETWSSLGSGSNHTPINGELGSFYRPDGLLANSKLKWETTISRNFGIDFGFLNNRVNGSLEVYWNTTKDLLMAVPVDNTTGYSYQFQNFGKTSNRGIELSVNVDVINKGDFRFNVGAIYNYNRNKLDELPNADQYLYSSYWGSSSLVPTNDYMFVEGKAIGLVR