ggKbase home page

L1_007_000M1_scaffold_22_66

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: 77590..78720

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sp. CAG:678 RepID=R5KKA2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 376.0
  • Bit_score: 659
  • Evalue 1.90e-186
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 376.0
  • Bit_score: 659
  • Evalue 2.70e-186
RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 360.0
  • Bit_score: 514
  • Evalue 1.60e-143

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:678 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1131
ATGGCTAATGCTAACACAAACGAAAAACCGTTGACAGCGGAAGAAAAAAAGGACAAGGCATTTAGAAAGCTTATTGAAAAGGGTAAGGCATCCGGTCATTTGACTGCGCAGGAGATTGATAATCTTATCGTAGAGCTTGACCTTGATGTTGACGAACTTGAAAAACTCAACGAGCAGATTGACGCCGCAAATATCAATATTATTGATGATTTTTCTGCAGAAACACTTGACGGAATTACTCTTGAGGTTGACCTTCCAAAGGAAACGGACGCAGCCGATACCGTTGCAGTTAATGACAATGCCGCTATGGATGACCCAGTTAAGGTTTATCTTAAAGAAATCGGAAGAATCCCTCTTTTGACCGCTGAGGAAGAAATAGAGCTTGCAATTAAAATTGCAGACGATGACCCGAATGCAAAGAAAAGACTTGCAGAGGCAAATCTTCGTCTTGTTGTCAGCATTGCCAAGAGATATGTCGGAAGAGGTATGCAGTTTCTTGATCTTATTCAAGAGGGCAACCTCGGTCTTATCAAGGCTGTTGACAAGTTCGATTATACCAAAGGTTTTAAGTTTTCAACATATGCAACTTGGTGGATAAGACAAGCCATCACAAGAGCAATTGCAGACCAGGCAAGGACAATTCGTATTCCTGTTCATATGGTTGAAACAATCAATAAAGTTAAAAAAGCTAATTCACAGCTTCTCCACCAAAACGGCAGAGAAGCCACTCCCGAAGAAATCGGCGAGTTCCTTGATATGCCGGTAGATAAGGTGCGTGAGATTTTGAGAGTCGCACAAGAGCCTGTTTCTCTTGAAACACCTATCGGTGAGGAGGAGGATTCCCACCTTGGCGACTTTATCCCGGATGACGATGCTTTGGCACCTGCCGACGCCGCATCAATGAGCTTGCTGAAGGAGCAGCTTTCCGAGGTGCTTAAAACACTTACTCCGAGAGAGGAAAAGGTGCTTTCTCTTCGTTTCGGTCTTGAGGACGGTAACCCGAAAACGCTTGAAGAAGTAGGCAAGGAATTTAATGTAACCCGTGAGCGTATCCGTCAGATTGAGGCAAAAGCACTCCGTAAACTTCGCCACCCGAGCAGAAGTAAAAAATTAAAGGACTTTTTGGATTAA
PROTEIN sequence
Length: 377
MANANTNEKPLTAEEKKDKAFRKLIEKGKASGHLTAQEIDNLIVELDLDVDELEKLNEQIDAANINIIDDFSAETLDGITLEVDLPKETDAADTVAVNDNAAMDDPVKVYLKEIGRIPLLTAEEEIELAIKIADDDPNAKKRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNLGLIKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKVKKANSQLLHQNGREATPEEIGEFLDMPVDKVREILRVAQEPVSLETPIGEEEDSHLGDFIPDDDALAPADAASMSLLKEQLSEVLKTLTPREEKVLSLRFGLEDGNPKTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKLKDFLD*