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L1_007_000M1_scaffold_8_144

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: comp(162126..165449)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 1094.0
  • Bit_score: 2130
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Alistipes onderdonkii RepID=UPI0003746A72 similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 1107.0
  • Bit_score: 2151
  • Evalue 0.0
transcription-repair coupling factor Mfd similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 1108.0
  • Bit_score: 2029
  • Evalue 0.0

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Taxonomy

Alistipes sp. CAG:29 → Alistipes → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3324
ATGACTGCCAGCGAGCAGCTGGCGCAGTTCGCCGCCGGGTCGAAGGCCCTGCCGAAGTTGTGCCGCGAATATAAGAAGGAGCGCGCAACCGTCCACCTGAAAGAGCTGGTCGGCGGTGCTCTTTCGTTTTATGCGGCGGCGGCAGTGGCGAAAACGGGAGGCGTGCATATCTTCGTGGCCGAAGACCGGGATGCCGCGGCCTACCTGCTGAACGATTTTTACAATCTGCTGGACGAGAAGCAGGTCTATTTCTTCCCGTCGTCCTACAAGCGTTCGGCGGCCTACGGCGCCGAGGATGCCCAGGGCGTGGTGCAGCGCACCACGGCGATGAACGCCGTGCGGGGCTTTACGAAGGGATACCTGGTGGTCTGCACCTATCCCGAAGCGCTGGCCGAACGGGTCGTCGACGCCGCGACGTTGCAGCGCGACACGATTGCCGTGAAGCTCGGCGACAAGATTTCGATCGCCGTGCTGGAAGATGCCCTTGCGGATGCGAACTTCACGCGTGTCGATTTCGTCTACGAACCGGGGCAGTACTCCGTGCGCGGAGGTATCGTCGATGTCTTTTCCTATTCGGAAAGCAAGCCTTACCGGATCGACTTTTTCGGCGACGAGGTCGACTCGATCCGCCGTTTCAATATTTCGAGCCAGCTTTCGGCCGACAAGCTCGACCGGGTGGAAATCGTCCCCAACCTCAATGCCGGCGAGGCACCCCGGGTGTCGTTCGTGCAGTTCGCGGGTTCTTCGGCAACCTGCTGGTTCTACGATGCCGACTACGTGCTGCGCCGTGTCAACGACCTGCGCCGCAAGGTGCTCGCGGACATGGAGGAGCCCGGGCAGATCGACCGCCTGCTGACCAGCCGCAACGTGCTGTTGCGCGACATGGCCGGCAACAGCGTGGTGGCGCTGCGCGACAACCTGCCGGAACGCCCCGCCACGGCGGCCGTGGTGTTCGACACGGCCCCGCAGCCCAAGTTCAATAAGAATTTCGAGATGCTGGCCGACGACATGATCCGCAATTCGCTGCGGGGCTATGCGACCTACATCCTCTCGGAGAACAAGGTGCAGGTCGAACGCCTCGAAAACATCTTCCACCAGATAGGGCGCGGGCAGGCCGCCGTGCGGTCGCTCTCCGTTACGTTGCACGAGGGGTTCGTGGACAACGACCTGAAACTGTGCCTCTATACCGACCACCAGATTTTCGACCGTTACCAGCGCTACCGCATCAACGGCGAGATCCGGCGCGACGAGCAGATGACCGTCGCCGAACTGAACCAGCTCCGCCCGGGTGACTATGTGGTGCATATCGACCACGGCGTGGGGCGTTTCGACGGGCTGGTGAAGATCAACGAGAACGGCAAGGTGCACGAGGCTATCAAGCTGGTATACAAGGACGGCGACGTGTTGTTCGTAAACGTCCATTCGCTCCACCGCATTTCGCGTTACAAGTCCGGCGACGGCGAGCCTCCGAAGGTCTATAAACTCGGCAACGGGGCATGGCAGAAACTCAAGAACGCCGCCAAGAAGGCCGTCAAGGATATCTCGCGCGAGCTGATCGCCCTCTATGCCAAGCGCAAGGCCAGCAAAGGGTTCGCATTCACACCCGACAGTTACCTGCAGCACGAGCTGGAGGCGTCGTTCCAGTGGGAGGACACCCCCGACCAGCAGACGACTGTCGCGGCCGTCAAGAAGGACATGGAGTCCGACCAGCCGATGGACAGGCTGGTCTGCGGCGACGTGGGCTTCGGCAAGACCGAGGTGGCGATCCGCGCGGCGTTCAAGGCTGCCGTGGACGGCAAGCAGGTAGCGGTGCTGGTGCCGACGACGATCCTCGCCCTGCAACACTACCGCTCCTTTTCGGAGCGCCTGCGCGATTTCCCCGTGCGGGTCGAGTATCTCAACCGCACCAAGACCGCCAAGGAGGCGGGGCAGATACGTGCCGACCTCGAATCGGGGCGTATCGACATCCTGATCGGCACCCATAAAATACTGGGCAAGCAGATCAAATTCCGTGACCTGGGGCTGCTGATCATCGACGAGGAACAGAAGTTCGGCGTCGCGGCCAAGGAGAAACTCACGCAGATGGCCGTCAACGTCGATACGCTGACCCTGACGGCGACGCCGATCCCGCGCACGCTGCAATTTTCGCTCATGGGCTCGCGCGACCTGTCGGTCATCTCGACCCCGCCGCCTAACCGCCAGCCGATCGTCACCGAGTCGCATGTCTTCTCCGAGGAGATCATCCGCGATGCCGTCGAGGCCGAGCTCGCACGCGGCGGCCAGGTTTATTTCGTCCATAACCGCGTCGAAGACCTGATGTCCATCCAAGGGCTTATCACGCGCGTATGCCCCAAGGCCCGCGTGGCCGTCGGACACGGCAAGATGCCGGCCGAGAAGCTCGAGAAGCTGATCATGGATTTTATATACGGGGAGTTCGACGTGCTCGTTTCGACCACGATCATCGAGAACGGCATCGACATCCCCAATGCCAATACGATCATTGTCGACAATGCCCAGAATTTCGGCCTGAGCGACCTGCACCAGTTGCGCGGGCGCGTGGGGCGCAGCAACCAGAAAGCCTACTGCTACCTGCTCTCGCCGCCCGAGGAGATGCTGTCGTCCGATGCGCGGCGCCGCCTGCGGGCGATCGAGGAGTTCTCCGACCTGGGGTCGGGGTTCAACATTGCGATGCAGGATCTCGACATCCGCGGCGCGGGCAACCTGCTGGGTGCCGAGCAGAGCGGGTTTATCGCCGACATCGGTTTCGAGACCTACCAGAAGATCATGAACGAGGCGATCGCCGAGCTGCGGGCCGAAGGCTTGCAGGTGGCGGGTCTGGGTGCCGCCGAGCAGGATGTCGTGGAGCAGATGCATTATGTGGATGACGCGCACATCGAAATAGAGGTCGAGGCCGGGCTGCCCGATGCCTACGTGGCACAGCAGGCCGAACGCCTGAAGCTCTACCGCGAGCTCGACTCGACCAAGGACGAAGCCGCGTTGCAGGCCTTCGAGAGCCGCCTGGCAGACCGTTTCGGCCCCCTGCCGCGCGAAGCGCAGGAACTGCTCAACGTCGTGCGCCTGCGCTGGGAGGCGATCCGCCTCGGCATCGAGCGGGTGAAGGTCAAGAACGGGCTGATGATCCTCCACTTCGTCGGCGAGCAGAACTCGCCCTATTACAAAAGCGATACCTTTATGGAGTTGCTCCGCAAGGTCACGCAAAATCCCGCCAGATTTGTGCTCAAACAGCACAATAATCGTCTGGCGATGACCGTTAGGAATGTCAAAGACATTGAGGACGGGTATAAAACACTGCAACAGCTTTGA
PROTEIN sequence
Length: 1108
MTASEQLAQFAAGSKALPKLCREYKKERATVHLKELVGGALSFYAAAAVAKTGGVHIFVAEDRDAAAYLLNDFYNLLDEKQVYFFPSSYKRSAAYGAEDAQGVVQRTTAMNAVRGFTKGYLVVCTYPEALAERVVDAATLQRDTIAVKLGDKISIAVLEDALADANFTRVDFVYEPGQYSVRGGIVDVFSYSESKPYRIDFFGDEVDSIRRFNISSQLSADKLDRVEIVPNLNAGEAPRVSFVQFAGSSATCWFYDADYVLRRVNDLRRKVLADMEEPGQIDRLLTSRNVLLRDMAGNSVVALRDNLPERPATAAVVFDTAPQPKFNKNFEMLADDMIRNSLRGYATYILSENKVQVERLENIFHQIGRGQAAVRSLSVTLHEGFVDNDLKLCLYTDHQIFDRYQRYRINGEIRRDEQMTVAELNQLRPGDYVVHIDHGVGRFDGLVKINENGKVHEAIKLVYKDGDVLFVNVHSLHRISRYKSGDGEPPKVYKLGNGAWQKLKNAAKKAVKDISRELIALYAKRKASKGFAFTPDSYLQHELEASFQWEDTPDQQTTVAAVKKDMESDQPMDRLVCGDVGFGKTEVAIRAAFKAAVDGKQVAVLVPTTILALQHYRSFSERLRDFPVRVEYLNRTKTAKEAGQIRADLESGRIDILIGTHKILGKQIKFRDLGLLIIDEEQKFGVAAKEKLTQMAVNVDTLTLTATPIPRTLQFSLMGSRDLSVISTPPPNRQPIVTESHVFSEEIIRDAVEAELARGGQVYFVHNRVEDLMSIQGLITRVCPKARVAVGHGKMPAEKLEKLIMDFIYGEFDVLVSTTIIENGIDIPNANTIIVDNAQNFGLSDLHQLRGRVGRSNQKAYCYLLSPPEEMLSSDARRRLRAIEEFSDLGSGFNIAMQDLDIRGAGNLLGAEQSGFIADIGFETYQKIMNEAIAELRAEGLQVAGLGAAEQDVVEQMHYVDDAHIEIEVEAGLPDAYVAQQAERLKLYRELDSTKDEAALQAFESRLADRFGPLPREAQELLNVVRLRWEAIRLGIERVKVKNGLMILHFVGEQNSPYYKSDTFMELLRKVTQNPARFVLKQHNNRLAMTVRNVKDIEDGYKTLQQL*