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L1_007_000M1_scaffold_86_62

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: 87328..87882

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=3 Tax=Parabacteroides RepID=A7AA13_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 184.0
  • Bit_score: 363
  • Evalue 8.00e-98
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDN88470.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 184.0
  • Bit_score: 363
  • Evalue 1.10e-97
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 179.0
  • Bit_score: 206
  • Evalue 6.10e-51

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Taxonomy

Parabacteroides merdae → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 555
ATGGAAACAGCCTCGGAGATAAAAGCTTTTAATAAATTGTTTGCCGATTACCACGGATTGTTTGTGCGTTTCGCCAATACGTACCTGCAAGATGAAGCGGCAGCGGAAGATATTGCTGTTGAGGGAATCATGTATTATTGGGAAAATCGCCATTCTCTTTCTTCCGATTCGAATATTCCTGCCTATATCCTGGAAGCGATCAAACATAAATGTCTGAATTACCTTCGTCATCTTCGTGTCCGCGAAGATGTGGAACAACGTATCCAGGAGCATCAGCAACGGGTGAATAGTCTGAGGATTGCCACCCTTGAAGCCTGCGATCCTCAGGAAATTTTCAGTTCGGAGGCCGGACGGCTCGTGGATGAGGCATTGGCAATGATGTCCGACAAAACCCGCCGGATCTTTATCATGAGCCGCTATGAAAATAAAACATACCCGGAAATCGCTGCCTATTTCTCGCTTTCCGTCAAGAGTGTGGAGTTCCACATATCCAAAGCATTGAAGATATTGAAAGTGAAGTTGAAGGATTATATGACGATTGTTTTGTTCATGTGA
PROTEIN sequence
Length: 185
METASEIKAFNKLFADYHGLFVRFANTYLQDEAAAEDIAVEGIMYYWENRHSLSSDSNIPAYILEAIKHKCLNYLRHLRVREDVEQRIQEHQQRVNSLRIATLEACDPQEIFSSEAGRLVDEALAMMSDKTRRIFIMSRYENKTYPEIAAYFSLSVKSVEFHISKALKILKVKLKDYMTIVLFM*