ggKbase home page

L1_007_000M1_scaffold_145_19

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: 24807..26135

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 interaction domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y6U9_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 442.0
  • Bit_score: 863
  • Evalue 5.90e-248
Sigma-54 interaction domain protein {ECO:0000313|EMBL:CDD14147.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 442.0
  • Bit_score: 863
  • Evalue 8.30e-248
two-component system response regulator similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 446.0
  • Bit_score: 728
  • Evalue 8.40e-208

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides merdae CAG:48 → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1329
ATGGGAAAAGTATTGATTATCGATGATGAGAAGCAAATTTTAAGCCTCCTGTCCCGTATTATCGGGTTGGAAGGTTATGAAGTGTTCCAAGCAGCCAACTGCAAAGTGGGTATCAAGCAGCTCGAACAGAATGATCCCGAAGTGGTGCTCTGTGATGTTTGCCTGCCGGACGGGAGCGGTGTGGAGCTTGTTTCTGAACTGAAACGCTTGCGTCCCCTTTCGGAAGTGATCTTGCTTACGGCCCACGGTAATATCCCCGACGGAGTACAAGCTATCAAGAACGGTGCGTTTGACTATATCACCAAAGGTGACGACAACAATAAAATCCTTCCCTTGATCGCAAAGGCGATGGAAAAGGCTACCGTTGCCTACAGCCAGCAGAAGGCTGTAGGCAAACAGTATTCGTTTGCCACTGTCATCGGCCGTTCGCCTGCTATAGAGGAGGCTGTTTCTTTGGCACGCAAGGTTGCCGCCACGGATGTTCCCGTCTTGCTCACCGGAGAGACCGGGACTGGCAAAGAAGTGTTTGCACAGTCCATCCACCAGCACAGTTCCCGCAGTGATAAAGCCTTTGTCGCTATCAACTGCTCCTCTTTCAGTCGCGACCTGTTGGAAAGCGAGATGTTCGGGCATAAGGCGGGAGCTTTCACCGGTGCACTCAAAGAGACGAAAGGACTGTTTGAGGAAGCAGACAACGGCACGATCTTTCTCGACGAGATCGGTGAGATGGCGTTCGATCTTCAGGCCAAGTTACTCCGTATTCTCGAAACCGGTGAATTCCTCAAGATTGGAGACACGAAACCTGTCAAGGTGAATGTGCGTGTGATAGCCGCCACCAACCGTGACTTAGCAAAAGAAATTGCCGACGGCCATTTTCGTGAGGACTTGTTTTACAGGCTTTCTGTTTTCCATATTCACCTGCCGCCGCTCCGCGAACGGGTGGACGACATTCCTCTGCATGTCGAGGCGTTTGTTTCCGCACTGTCTTCCAAGATAGGAAAGACCATCCGCACGATCTCGCCGGACTATGTCCGTATCTTGAAACGGTATCCTTGGAAAGGGAATGTCCGTGAACTGCGCAATGTCGTGGAGCGCAGCCTCATTATCTCCGATGGAGACACCTTGACTGCAGACACCTTGCCGCTCACAATACAGAATCCTCAAAATAATACCGACAGCAGCTATTCCGGCTTCGACCTTGACGGCGTAGAGAAGATGCATATTCAAAAGGTATTGAAGTATACCAACGGCAACAAGACGGAAACCTCCCGCCTGTTAGGTATCGGCTTGACGACCCTCTACAGGAAGATCGAAGAATATGGCCTTTGA
PROTEIN sequence
Length: 443
MGKVLIIDDEKQILSLLSRIIGLEGYEVFQAANCKVGIKQLEQNDPEVVLCDVCLPDGSGVELVSELKRLRPLSEVILLTAHGNIPDGVQAIKNGAFDYITKGDDNNKILPLIAKAMEKATVAYSQQKAVGKQYSFATVIGRSPAIEEAVSLARKVAATDVPVLLTGETGTGKEVFAQSIHQHSSRSDKAFVAINCSSFSRDLLESEMFGHKAGAFTGALKETKGLFEEADNGTIFLDEIGEMAFDLQAKLLRILETGEFLKIGDTKPVKVNVRVIAATNRDLAKEIADGHFREDLFYRLSVFHIHLPPLRERVDDIPLHVEAFVSALSSKIGKTIRTISPDYVRILKRYPWKGNVRELRNVVERSLIISDGDTLTADTLPLTIQNPQNNTDSSYSGFDLDGVEKMHIQKVLKYTNGNKTETSRLLGIGLTTLYRKIEEYGL*