ggKbase home page

L1_007_000M1_scaffold_5688_2

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: comp(221..532)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2PLQ2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 85.0
  • Bit_score: 168
  • Evalue 2.80e-39
Uncharacterized protein {ECO:0000313|EMBL:EDY32844.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 85.0
  • Bit_score: 168
  • Evalue 3.90e-39
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 91.0
  • Bit_score: 97
  • Evalue 1.70e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus lactaris → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 312
TTGAAACCATCAGACTTCCAAAAGACAATACAGTGTCAGTTTGACTGTAAGCTCAATTACGAAAGTGAATATACAACATTCGATGTGTGCGGTACAGAAATCCGTGTACTTGATGAAGAACTTGCAGAAGCACTGAAACAGTTGCCGGAGCAGAGTCGGAACATTGTATTGATGTTTTTCTTCTTGGATATGAGCGATTCGGAGATAGGCGAAAAGCTGAACATCAACCGAAGCACATCATACAGACACAGAAGAAATTCACTTGAAGAAATCAGAAAGCAGTTAAAGGAGAAGAAAACAAATGAAGAATAA
PROTEIN sequence
Length: 104
LKPSDFQKTIQCQFDCKLNYESEYTTFDVCGTEIRVLDEELAEALKQLPEQSRNIVLMFFFLDMSDSEIGEKLNINRSTSYRHRRNSLEEIRKQLKEKKTNEE*