ggKbase home page

L1_007_000M1_scaffold_11068_2

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: comp(134..1399)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 421.0
  • Bit_score: 847
  • Evalue 7.70e-243
RNA-splicing ligase RtcB n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QUA2_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 421.0
  • Bit_score: 847
  • Evalue 5.50e-243
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 434.0
  • Bit_score: 366
  • Evalue 6.10e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bacteroides fragilis → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1266
ATGATTGAATTACAAGGAAAATTCGGCAAAGATTGTAAAATATTTGCAAATACAATAGAAAATGAAGCTATTGGAACGATACAAAACATTTTGAACAATCCGGTTACGACTGGTGTTCCGGTTCGTATTATGCCTGATACCCATCAAGGAGTAGATATAGTGATTGGATTCACCATGCCAGTTACAGATCGTGTCAACCCCAATCATATCGGAGTGGATATTGGTTGTGGAATGTTGTGTGTAGAAATTGAAAACGCAATAACAGAAGGTTCTTTCCCGGACATTAATCATGCAATCCGTTCCATCATACCTATGGGATTTGAGATTAACCAACAACCCTTATCCAAACAAGAAAAGGAAGATTTGTTTACCTTCTTATCTATCAGAATGGATCAGTTCTGCTCTAAATACCAACTAACCAAACCAGTTATTAATGAAGAATATGTATCACAACTTTGTAAGAAGGTGGGGATAAATGAAGGCGCATTCTACAACTCTTTAGGTACATTGGGAGGTGGAAACCACTTTATAGAACTGGGGCGTGCCGAGTCAACCAATAATATATTTCTTACAATACATACCGGATCGCGCAACTTTGGTGTGAAGGTCTGTAAATTCCATGCAGAAATAGCAAAATTTGACAAAAAGGCTTTTTCTAATGAAATTCAACGCTTGAAGTCCACTGTTGAGCCACAATTCATGCAAACTGAAATACTACGTTTGAAGGAAAAATTTACCGAATATTCTGGGTATCTCACAAATGAAGCAATGCTCCACTATTTATGTGACATGGTGATCGCACAAGGATATGCCGCATTCAACCGCAAGTTGATTATACAACGTATAATCAGAGCTTTGGGCTGGAACGCTGCAATATCCGTTGAGACAGTCCATAACTATATCAGCTTTGATGATATGATAATCCGTAAAGGGGCTATTGCCGCATACGCCAATGATTACGTTGTGATTCCTATGAATATGGCAGACGGTATTCTTCTTTGTCGTGGTAAGGGAAACAAAGACTGGAACTATTCTGCACCACATGGTGCAGGACGCTTATACTCCCGTTCCGAAGCTAAAGAAAGATTATCAATGGACGCATTCAAAACCCAAATGAGCAAAGTGTATTCCACTTCCGTATGTGAAGGGACATTGGATGAAAGTCCTATGGCATACAAAAATGTTCAGGAAATAAAAGAGCTTATAGAACCTACGGTAGATATTATTGATACAATTGTGCCACTAATCAATATCAAAGCTGTATGA
PROTEIN sequence
Length: 422
MIELQGKFGKDCKIFANTIENEAIGTIQNILNNPVTTGVPVRIMPDTHQGVDIVIGFTMPVTDRVNPNHIGVDIGCGMLCVEIENAITEGSFPDINHAIRSIIPMGFEINQQPLSKQEKEDLFTFLSIRMDQFCSKYQLTKPVINEEYVSQLCKKVGINEGAFYNSLGTLGGGNHFIELGRAESTNNIFLTIHTGSRNFGVKVCKFHAEIAKFDKKAFSNEIQRLKSTVEPQFMQTEILRLKEKFTEYSGYLTNEAMLHYLCDMVIAQGYAAFNRKLIIQRIIRALGWNAAISVETVHNYISFDDMIIRKGAIAAYANDYVVIPMNMADGILLCRGKGNKDWNYSAPHGAGRLYSRSEAKERLSMDAFKTQMSKVYSTSVCEGTLDESPMAYKNVQEIKELIEPTVDIIDTIVPLINIKAV*