ggKbase home page

L1_007_000M1_scaffold_25219_1

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: comp(3..1301)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 433.0
  • Bit_score: 816
  • Evalue 1.10e-233
DNA-directed RNA polymerase subunit beta n=4 Tax=Clostridium bolteae RepID=N9ZZN8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 433.0
  • Bit_score: 816
  • Evalue 8.20e-234
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 425.0
  • Bit_score: 738
  • Evalue 8.00e-211

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] bolteae → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1299
GGTGAAACGTCAATGGAGAAAAGCAGAATACGTCCGGTACCGGCCGGGAAAAGCGTAAGAATGAGCTATTCAAGGCAGAAGGAAGTCCTTCAGATGCCAAACCTGATCGAGATTCAGAAAGACTCCTATCAGTGGTTCTTAGACGAAGGACTGAAGGAAGCATTTGATGACATCTCTCCGATCACTGACTTCGCAGGACATCTGAGCCTGGAATTCGTTGACTTTACATTATGTAAGGATGATGTCAAGTACACCATCGAAGAGTGTAAGGAACGCGATGCCACTTACGCGGCACCACTTAAGGTAAAGGTTAGACTGTACAATAAAGATAAAGATGAGATGAACGAACATGAGATATTCATGGGAGATCTGCCTCTGATGACAGACACGGGCTCCTTCGTTATCAACGGTGCAGAACGTGTTATCGTCAGCCAGCTTGTGCGTTCCCCTGGTATCTACTATGGCATTGGTCACGATAAGGTGGGTAAGGAGTTATATACATGTACTGTGATCCCCAACCGCGGCGCATGGCTGGAGTACGAGACAGACTCCAACGATGTATTTTATGTCCGCGTGGACAGAACCCGTAAGGTTCCTGTTACCGTGCTGATCCGTGCTCTGGGCTTCGGCACCAATGCAGAGATTTTAGAACTGTTCGGCGAAGAGCCAAAGCTTCTTGCCAGCTTCGGAAAGGATACCTCCGATAACTATCAGGACGGTCTGTTAGAGCTGTACAAGAAGATCCGTCCCGGTGAGCCGTTATCCGTTGACAGCGCGGAGAGCCTGCTCAACAGTATGTTCTTTGATCCCAGAAGATATGATCTGGCAAAGGTGGGACGTTATAAATTTAATAAGAAGCTGTCCTTTAAGTTCCGCCTCAATGGCCAGGTTCTGGCTGAGGATGTGGTGAATGAGGAGACAGGTGAGATTTTAGCCGAGGCAGGCACAAAGCTTGATAAGGAGTCTGCGATGCGTCTGCAGAACTCCGGCGTTCCCTTCGTATGGGTAGAAGGATCAAACAGAAAGCAGAAGGTTCTTTCCAATATGATGGTTGAGCTTGACGCTCATGTTTCCTTCGATCCGGAGGAGGTTGGCGTTACAGAATTAGTATACTACCCTGTGCTGTCTGCTATTCTGGAAAAAGCAGGTTCGGATGAGGAGCTTTTAAAGGAAGAAATTCGTAAGAATATTCACGATCTGATTCCAAAGCACATCACAAAGGAAGATATCATTGCTTCCATCAACTACAATATGCATCTGGAAGAGGAAGTGGGAACGGCTGATGATATCGACCATCTT
PROTEIN sequence
Length: 433
GETSMEKSRIRPVPAGKSVRMSYSRQKEVLQMPNLIEIQKDSYQWFLDEGLKEAFDDISPITDFAGHLSLEFVDFTLCKDDVKYTIEECKERDATYAAPLKVKVRLYNKDKDEMNEHEIFMGDLPLMTDTGSFVINGAERVIVSQLVRSPGIYYGIGHDKVGKELYTCTVIPNRGAWLEYETDSNDVFYVRVDRTRKVPVTVLIRALGFGTNAEILELFGEEPKLLASFGKDTSDNYQDGLLELYKKIRPGEPLSVDSAESLLNSMFFDPRRYDLAKVGRYKFNKKLSFKFRLNGQVLAEDVVNEETGEILAEAGTKLDKESAMRLQNSGVPFVWVEGSNRKQKVLSNMMVELDAHVSFDPEEVGVTELVYYPVLSAILEKAGSDEELLKEEIRKNIHDLIPKHITKEDIIASINYNMHLEEEVGTADDIDHL