ggKbase home page

L1_007_000M1_scaffold_63100_1

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: comp(15..1079)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 304.0
  • Bit_score: 406
  • Evalue 2.90e-110
Transcription-repair-coupling factor n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MMT9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 304.0
  • Bit_score: 406
  • Evalue 2.10e-110
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 394.0
  • Bit_score: 342
  • Evalue 1.00e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Firmicutes bacterium CAG:41 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1065
ACTGCAACGCCTATACCGCGTACCTTGCATATGGCAATGACGGGTGTAAGAGATATGAGTGTGCTTTCGGAACCGCCCGAAAACAGATACCCTGTACAGACGTATGTTTTGGAGGACAATCCGGCAGTTATAGCGGACGCTGTCAGAAATGAACTGTCACGCGGAGGACAGGTGTTTTATCTGTATAACCGTGTACAGGGAATATACAGAAAAGCGGAATGGATACGTTCAATGTTCCCCGATATAACCGTTGCAGTCGGTCACGGTAAGATGAAAGAGGACGAACTTGAAGATATTATGTACGATATGGTAAACGGCAAAACCGACGTACTTGTCTGTACGACTATTATCGAAACAGGTCTTGACATTCCGAATGCGAATACGATTATAATTGAAAATGCCGATAAAATGGGACTTTCACAGCTTTATCAGTTAAGAGGACGTGTCGGACGTTCAAATCGTGCGGCATATGCGTATTTGACGTATCACAGAGATAAGATATTATCGGATATTGCGTCAAAAAGACTTCGTGCGGTAAAGGAATTTACCGAGTTCGGTTCGGGATTTAAAATCGCAATGCGTGACCTTGAGATCAGAGGTGCGATTGATATAAATATTGACGCATATTTGCCTGAAAGCTATATCAGAAACCACAATCAACGTATTGATATATACAAGAAAATCGCGGCAATCGAAACGGAGGACGATAAGTTTGAAATCGAGGACGAACTTATCGACAGATTTGGTGATATACCGAGAGCCGTACAAAATATTATCGAAGTTGCGTCACTTAAAACGTATGCCAAAGAATGTGGTATATATGAAATAGCACAGAGCGGTGACAATCTTTTGATGAAATTCGGCGAAAATTACGTTGACGCAAATCTTATTATGGGACTTGATAAAATGTTCCCTAAACGCATAAAGCTGTTGTCGGGCGACAAACCTGTCATAAGCTATGCGATTAAGGGTGAATATAAGAAAATCTTGAATATTGTAAATAATTTGTTAAGTACAATAAAGGAATTGCAAAGTGCCGAAAAAGATAGTATAATAAAATCATAA
PROTEIN sequence
Length: 355
TATPIPRTLHMAMTGVRDMSVLSEPPENRYPVQTYVLEDNPAVIADAVRNELSRGGQVFYLYNRVQGIYRKAEWIRSMFPDITVAVGHGKMKEDELEDIMYDMVNGKTDVLVCTTIIETGLDIPNANTIIIENADKMGLSQLYQLRGRVGRSNRAAYAYLTYHRDKILSDIASKRLRAVKEFTEFGSGFKIAMRDLEIRGAIDINIDAYLPESYIRNHNQRIDIYKKIAAIETEDDKFEIEDELIDRFGDIPRAVQNIIEVASLKTYAKECGIYEIAQSGDNLLMKFGENYVDANLIMGLDKMFPKRIKLLSGDKPVISYAIKGEYKKILNIVNNLLSTIKELQSAEKDSIIKS*