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L1_007_000M1_scaffold_2465_32

Organism: dasL1_007_000M1_concoct_30_fa

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38
Location: 32851..33615

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 249.0
  • Bit_score: 370
  • Evalue 1.30e-99
pseudouridylate synthase I (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 248.0
  • Bit_score: 325
  • Evalue 1.20e-86
tRNA pseudouridine synthase A n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPA6_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 249.0
  • Bit_score: 370
  • Evalue 9.10e-100

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 765
ATGAATATTCTCCTCTGGCTTGCCTACAAGGGCACAAATTATTCGGGGTTTCAGGTGCAGCCCAATGGGGTTACGGTGTGTGCGGTGGTGCAGGATGCTATGCAGAGCGTGTTTGGCACCCGGCCCGATGTAAAGGGCTGTTCCCGCACCGATGCCGGGGTGCATGCCCGGCGGTTTGCCCTGAACTTCCATTATGATGGCCGCATCCCGGTGCAGCGCATCCCGCTGGCGTTGAACGCCCGCCTGCCCATGGATGTGCGGGCACTGGCAGCGCAGCAGGTGCCGGATGATTTCCACGCCCGCTATGCCGCCCACGCCAAAACCTACCACTACCGCCTGCGGTGCAGCGCGGTGGATGATCCCTTTGATTATGAGACCTGCCACCGGGTCAACGGCCCGCTGGACCTTGCCGCCATGCAGGCGGCGGCTGCCCATTTTGTTGGCAGGCATGACTTTTTGGCGCTGTGCGCTTCGGGCTCTTCAGCCGCAGCCCACGGCGATACGGTGCGCACCATCACCGCCTGCACCGTGCAGCAGGATGGCGAGCTGTATACCCTGTCCGTAACAGCGGACGGCTACCTGTACAACATGGTGCGCATTCTGACCGGTACGGTGCTGCAGGCGGGCCTTGGCAAAATGAATCCGGCCGCTGTGCCTGCTCTGCTGCAAAGCAGGAACCGCGGCCAGGCCGGCCCCACGCTGCCCGCCAGGGGGCTGTTTTTGTGGGATGTGCAGTACCCGGATTTAGAGCGCCCGAACGACTGA
PROTEIN sequence
Length: 255
MNILLWLAYKGTNYSGFQVQPNGVTVCAVVQDAMQSVFGTRPDVKGCSRTDAGVHARRFALNFHYDGRIPVQRIPLALNARLPMDVRALAAQQVPDDFHARYAAHAKTYHYRLRCSAVDDPFDYETCHRVNGPLDLAAMQAAAAHFVGRHDFLALCASGSSAAAHGDTVRTITACTVQQDGELYTLSVTADGYLYNMVRILTGTVLQAGLGKMNPAAVPALLQSRNRGQAGPTLPARGLFLWDVQYPDLERPND*