ggKbase home page

L1_007_000M1_scaffold_1168

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1168_1
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(255..842)
DNA (588bp) protein (196aa)
ComF family protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQX2_MEGEL
ComF family protein
ComF family protein {ECO:0000313|EMBL:CCC73822.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_1168_2
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(867..3026)
DNA (2160bp) protein (720aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Helicase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQX1_MEGEL
helicase
L1_007_000M1_scaffold_1168_3
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3026..3298)
DNA (273bp) protein (91aa)
Chorismate mutase n=2 Tax=Megasphaera RepID=S7HID5_9FIRM
Chorismate mutase {ECO:0000313|EMBL:EPP16692.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
chorismate mutase
L1_007_000M1_scaffold_1168_4
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3505..4959
DNA (1455bp) protein (485aa)
Lysine-specific permease n=1 Tax=Megasphaera sp. NM10 RepID=S7ISA3_9FIRM
lysine-specific permease
Lysine-specific permease {ECO:0000313|EMBL:EPP14331.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L1_007_000M1_scaffold_1168_5
unknown

Not on your lists

comp(5251..5403)
DNA (153bp) protein (51aa)

This feature has no annotations

L1_007_000M1_scaffold_1168_6
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5460..6656
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MYP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF04992.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
hypothetical protein
L1_007_000M1_scaffold_1168_7
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6762..7868)
DNA (1107bp) protein (369aa)
Oye family NADH-dependent flavin oxidoreductase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BY36_9FIRM
Oye family NADH-dependent flavin oxidoreductase {ECO:0000313|EMBL:CCX56331.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
NADH-dependent flavin oxidoreductase
L1_007_000M1_scaffold_1168_8
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8141..8944)
DNA (804bp) protein (268aa)
Predicted amidohydrolase (EC:3.5.1.53)
Hydrolase, carbon-nitrogen family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KIX7_9FIRM
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:EEX70240.1}; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
L1_007_000M1_scaffold_1168_9
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(8966..10129)
DNA (1164bp) protein (388aa)
aspartate aminotransferase A (EC:2.6.1.1)
Aspartate aminotransferase A {ECO:0000313|EMBL:ACM05539.1}; EC=2.6.1.1 {ECO:0000313|EMBL:ACM05539.1};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
Aspartate aminotransferase A n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1P0_THERP
L1_007_000M1_scaffold_1168_10
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10151..10765)
DNA (615bp) protein (205aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PS54_9CLOT
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:EET87979.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
ribonuclease E inhibitor RraA/dimethylmenaquinone methyltransferase
L1_007_000M1_scaffold_1168_11
S_Thermacetogenium_phaeum_55_64, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10781..11452)
DNA (672bp) protein (224aa)
Putative ribonuclease E inhibitor RraA/dimethylmenaquinone methyltransferase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LKT2_THEPS
ribonuclease E inhibitor RraA/dimethylmenaquinone methyltransferase
Tax=S_Thermacetogenium_phaeum_55_64
L1_007_000M1_scaffold_1168_12
Paenisporosarcina sp. HGH0030, Paenisporosarcina, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11442..12851)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Paenisporosarcina sp. HGH0030 RepID=S2XIA4_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EPD51641.1}; TaxID=1078085 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Paenisporosarcina.;" source="Paenisporosarcina sp. HGH0030.;"
amino acid transporter
L1_007_000M1_scaffold_1168_13
Edwardsiella tarda, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12866..14029)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=3 Tax=Edwardsiella tarda RepID=D0Z8X3_EDWTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY84872.1}; TaxID=498217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella.;" source="Edwardsiella tarda (strain EIB202).;"
L1_007_000M1_scaffold_1168_14
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14172..15068
DNA (897bp) protein (299aa)
Transcriptional regulator n=1 Tax=Blautia sp. CAG:237 RepID=R6L0K6_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDB76969.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Transcriptional regulator
L1_007_000M1_scaffold_1168_15
unknown

Not on your lists

15074..15208
DNA (135bp) protein (45aa)

This feature has no annotations

L1_007_000M1_scaffold_1168_16
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15177..18890)
DNA (3714bp) protein (1238aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BDG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53383.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
autotransporter protein
L1_007_000M1_scaffold_1168_17
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19119..22178)
DNA (3060bp) protein (1020aa)
Uncharacterized protein n=1 Tax=Acidaminococcus intestini CAG:325 RepID=R6M3E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB92875.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
autotransporter protein
L1_007_000M1_scaffold_1168_18
unknown

Not on your lists

comp(22413..22565)
DNA (153bp) protein (51aa)

This feature has no annotations

L1_007_000M1_scaffold_1168_19
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22724..23431)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MW48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF04087.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
hypothetical protein
L1_007_000M1_scaffold_1168_20
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23436..24158)
DNA (723bp) protein (241aa)
DNA integration/recombination/inversion protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQB8_MEGEL
DNA integration/recombination/inversion protein
DNA integration/recombination/inversion protein {ECO:0000313|EMBL:CCC73646.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_1168_21
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24327..24956)
DNA (630bp) protein (210aa)
IS605 OrfB family transposase n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5H4_9FIRM
IS605 OrfB family transposase {ECO:0000313|EMBL:EHR38692.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
transposase
Displaying 21 items

View Taxonomy