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L1_007_000M1_scaffold_2776

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2776_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3..1727)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8K2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24898.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_2776_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1895..2401)
DNA (507bp) protein (169aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Signal peptidase I n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QEZ2_9FIRM
signal peptidase I
L1_007_000M1_scaffold_2776_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2428..3153)
DNA (726bp) protein (242aa)
RNA polymerase sigma factor n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q844_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
sigF; RNA polymerase sigma-F factor
L1_007_000M1_scaffold_2776_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3146..3571)
DNA (426bp) protein (142aa)
spoIIAB; bifunctional anti-sigma F factor/non-specific serine/threonine protein kinase (EC:2.7.11.1)
Anti-sigma F factor n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRP6_9FIRM
Anti-sigma F factor {ECO:0000313|EMBL:CCZ24901.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_2776_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3568..3891)
DNA (324bp) protein (108aa)
Anti-sigma factor antagonist n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QV46_9FIRM
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
anti-sigma F factor antagonist
L1_007_000M1_scaffold_2776_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3980..4774)
DNA (795bp) protein (265aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8K7_9FIRM
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CCZ24903.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
dacF; penicilin binding protein
L1_007_000M1_scaffold_2776_7
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4761..6314)
DNA (1554bp) protein (518aa)
Recombinase family protein n=1 Tax=Clostridium difficile P51 RepID=T4RVK1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EOS46572.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
conjugative transposon recombinase
L1_007_000M1_scaffold_2776_8
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(6311..7954)
DNA (1644bp) protein (548aa)
Resolvase domain protein n=1 Tax=Clostridium thermocellum JW20 RepID=D1NLU0_CLOTM
Resolvase domain protein {ECO:0000313|EMBL:CDB98064.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
resolvase domain-containing protein
L1_007_000M1_scaffold_2776_9
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(8271..8711)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LDA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFY05115.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
toxin Fic
L1_007_000M1_scaffold_2776_10
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8816..8935)
DNA (120bp) protein (40aa)
Toxin-antitoxin system toxin component Fic family n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GIM1_9FIRM
Toxin-antitoxin system toxin component Fic family {ECO:0000313|EMBL:CDE27219.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
toxin Fic
L1_007_000M1_scaffold_2776_11
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(8932..9216)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YC44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12746.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L1_007_000M1_scaffold_2776_12
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9720..10496)
DNA (777bp) protein (259aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Paenibacillus RepID=F5LPW9_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KGR78718.1}; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
tungsten formylmethanofuran dehydrogenase
L1_007_000M1_scaffold_2776_13
Firmicutes bacterium M10-2, Firmicutes, Bacteria

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comp(10508..11977)
DNA (1470bp) protein (490aa)
bglA4; aryl-phospho-beta-D-glucosidase BglA (EC:3.2.1.86)
Uncharacterized protein n=1 Tax=Firmicutes bacterium M10-2 RepID=R9LPH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS60226.1}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
L1_007_000M1_scaffold_2776_14
unknown

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comp(11970..12074)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 14 items

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