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L1_007_000M1_scaffold_12

Search features with annotation key words

Displaying items 31-60 of 283 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_12_31
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27471..28601)
DNA (1131bp) protein (377aa)
Citrate transporter n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8P7_9FIRM
Citrate transporter {ECO:0000313|EMBL:EDP22379.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
transporter, YbiR family
L1_007_000M1_scaffold_12_32
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28667..29128)
DNA (462bp) protein (154aa)
Predicted permeases n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8F6_9FIRM
Predicted permeases
Predicted permeases {ECO:0000313|EMBL:CBL01119.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_12_33
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29396..30787)
DNA (1392bp) protein (464aa)
Transporter n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7E0_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Na+-dependent transporters of the SNF family
L1_007_000M1_scaffold_12_34
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30904..31800
DNA (897bp) protein (299aa)
LysR substrate binding domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8P4_9FIRM
Transcriptional regulator
LysR substrate binding domain protein {ECO:0000313|EMBL:EDP22376.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_007_000M1_scaffold_12_35
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32151..32816)
DNA (666bp) protein (222aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7D5_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EEU96154.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L1_007_000M1_scaffold_12_36
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32916..33635
DNA (720bp) protein (240aa)
4Fe-4S binding domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8N6_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDP22368.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
4Fe-4S binding domain.
L1_007_000M1_scaffold_12_37
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33676..34641)
DNA (966bp) protein (322aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Pyruvate kinase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMH8_9FIRM
Pyruvate kinase
L1_007_000M1_scaffold_12_38
unknown

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comp(34638..34940)
DNA (303bp) protein (101aa)

This feature has no annotations

L1_007_000M1_scaffold_12_39
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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35035..35232
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77299.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_007_000M1_scaffold_12_40
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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35496..36308
DNA (813bp) protein (271aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7C5_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEU96195.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
D-alanyl-D-alanine carboxypeptidase
L1_007_000M1_scaffold_12_41
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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36327..37610
DNA (1284bp) protein (428aa)
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EEU96194.1}; EC=3.4.24.- {ECO:0000313|EMBL:EEU96194.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Peptidase M16 inactive domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7C4_9FIRM
peptidase M16 domain-containing protein
L1_007_000M1_scaffold_12_42
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37603..38922
DNA (1320bp) protein (440aa)
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EEU96193.1}; EC=3.4.24.- {ECO:0000313|EMBL:EEU96193.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Peptidase M16 inactive domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7C3_9FIRM
Predicted Zn-dependent peptidases
L1_007_000M1_scaffold_12_43
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38919..39977
DNA (1059bp) protein (353aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7C2_9FIRM
L1_007_000M1_scaffold_12_44
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


40109..40420
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7C1_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
LSU ribosomal protein L21P
L1_007_000M1_scaffold_12_45
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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40435..40686
DNA (252bp) protein (84aa)
50S ribosomal protein L27 n=3 Tax=Faecalibacterium prausnitzii RepID=D4KBV1_9FIRM
LSU ribosomal protein L27P
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_12_46
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40869..42152
DNA (1284bp) protein (428aa)
GTPase Obg n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7B9_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Obg family GTPase CgtA
L1_007_000M1_scaffold_12_47
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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42275..42730
DNA (456bp) protein (152aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Mini-ribonuclease 3 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7B7_9FIRM
hypothetical protein
L1_007_000M1_scaffold_12_48
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42801..42956)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96186.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_000M1_scaffold_12_49
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43046..44590
DNA (1545bp) protein (515aa)
tRNA and rRNA cytosine-C5-methylases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3W9_9FIRM
tRNA and rRNA cytosine-C5-methylases
tRNA and rRNA cytosine-C5-methylases {ECO:0000313|EMBL:CBK98212.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_000M1_scaffold_12_50
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44769..45506
DNA (738bp) protein (246aa)
Probable transcriptional regulatory protein FAEPRAA2165_02196 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7B2_9FIRM
Probable transcriptional regulatory protein FAEPRAA2165_02196 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
conserved hypothetical protein TIGR01033
L1_007_000M1_scaffold_12_51
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45665..47380
DNA (1716bp) protein (572aa)
PASTA domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7B0_9FIRM
PASTA domain protein {ECO:0000313|EMBL:EEU96217.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_000M1_scaffold_12_52
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47788..49788
DNA (2001bp) protein (667aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7A6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96213.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_000M1_scaffold_12_53
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49923..51401)
DNA (1479bp) protein (493aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.14 1.4.1.13)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7A5_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EEU96212.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_000M1_scaffold_12_54
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(51415..55950)
DNA (4536bp) protein (1512aa)
Glutamate synthase domain 2 (EC:1.4.1.13 1.4.1.14)
Class II glutamine amidotransferase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q0Z1_9FIRM
Class II glutamine amidotransferase {ECO:0000313|EMBL:CDC29440.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L1_007_000M1_scaffold_12_55
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56279..58888)
DNA (2610bp) protein (870aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TFS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC72298.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
cell surface protein precursor, LPXTG-motif cell wall anchor
L1_007_000M1_scaffold_12_56
unknown

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comp(58885..59322)
DNA (438bp) protein (146aa)

This feature has no annotations

L1_007_000M1_scaffold_12_57
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(59621..61198)
DNA (1578bp) protein (526aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hydroxylamine reductase (EC:1.7.-.-)
Hydroxylamine reductase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7A1_9FIRM
L1_007_000M1_scaffold_12_58
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61312..62664)
DNA (1353bp) protein (451aa)
glutamate dehydrogenase (NADP) (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7A0_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_000M1_scaffold_12_59
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62817..63068)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H799_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96206.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_000M1_scaffold_12_60
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63146..63979)
DNA (834bp) protein (278aa)
ATPases involved in chromosome partitioning n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QEX1_9FIRM
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CDC29436.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ATPases involved in chromosome partitioning
Displaying items 31-60 of 283 in total

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