ggKbase home page

L1_007_000M1_scaffold_5400_9

Organism: dasL1_007_000M1_concoct_59_fa

near complete RP 50 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38
Location: 8866..9414

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SA20_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 379
  • Evalue 1.10e-102
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDP21896.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 379
  • Evalue 1.50e-102
sigma-70, region 4 family similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 132.0
  • Bit_score: 93
  • Evalue 5.70e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Faecalibacterium prausnitzii → Faecalibacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 549
ATGAACGGCAGGAAAAATTTTCATACCAATCTTAAAAATCAGCCAAATGAACCCGTTGGTGAACGAGTAGTGAGCGAAAGGGGAAGAAAAGAGCTGCCTCCCAGCACGAGGGGAGGTGAAAACTTGAAACCAAACCGCTACTACGAACACAAGCAGCACGCCTTTGACAGCTACTGCAAAAAGGTGTTGAAATGCGAGGCATGTAACGGCTATCGGCAGATCAGCCGTCATCAAAAACGTTTTGCATCTTTGGAAGAACTGTCCGAGGCAGATGTGGCCCAGCTTGCAGTTTACGATCGTTACTCATGGGAGTATACGGCTTTTCCCGTGGGAAATGCTGTTGTGCTAATCGAGAACGACCGATTGGCCACAGCACTTCTACGGCTGTCACCAAAAGACCGGGAAATTTTTATGATGCACTGGTTTCTATGGATGACAGACGAACAGATAGCAAAGTGCATGGGCATGGCCAGAAGAACGGTCAATACTCGCAGGTATAAAGCCTATCGGCTGCTGAAAAAGCTGATGGGAGGTGAAGCGGATGACTAA
PROTEIN sequence
Length: 183
MNGRKNFHTNLKNQPNEPVGERVVSERGRKELPPSTRGGENLKPNRYYEHKQHAFDSYCKKVLKCEACNGYRQISRHQKRFASLEELSEADVAQLAVYDRYSWEYTAFPVGNAVVLIENDRLATALLRLSPKDREIFMMHWFLWMTDEQIAKCMGMARRTVNTRRYKAYRLLKKLMGGEADD*