ggKbase home page

L1_007_000M1_scaffold_28621_1

Organism: dasL1_007_000M1_concoct_59_fa

near complete RP 50 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38
Location: 2..838

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirD4 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH98_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 276.0
  • Bit_score: 537
  • Evalue 4.70e-150
TraG/TraD family protein {ECO:0000313|EMBL:EDP20672.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 276.0
  • Bit_score: 537
  • Evalue 6.60e-150
Type IV secretory pathway, VirD4 components similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 276.0
  • Bit_score: 535
  • Evalue 8.60e-150

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Faecalibacterium prausnitzii → Faecalibacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 837
GGCAAGACCCGTTCCTCCATCCTGATAAGCTGTGGTGCCCGTTTAGCCCCATTTGACATCCGGGAGGTGCGGGAGCTGATGGAGGACGATGAAATGGAGCTGGACACCATCGGGGATGAAAAGACCGTGCTGTTTTTGATTATGAGCGACACAGACACCACCTTCAACTTCATTCTTGCCATGCTTCAAAGCCAGCTTATCAACCTGCTGTGTGACCGCGCGGATGATAAATACGGCGGGCGGCTGCCCGTCCATGTACGGCTGATTCTGGACGAGTTCGCCAACATCGGGCAGATTCCCAACTTCGACAAGCTGATTGCCACCATCCGCAGCCGGGAAATCTCGGCATCCATCATTTTGCAGAGCCAGTCGCAGCTGAAAGCCATCTACAAAGATGCGGCCGAAATCATTTCGGACAACTGCGATTCTGTTCTCTTTTTGAGTGGGCGGGGCAAGAATGCCAAAGAGATCTCCGATGCGCTGGGGAAAGAGACCATCGACAGTTTCAACACCAGCGAGAACCGGGGTTCTCAAACCTCCCACGGACTGAACTATCAAAAATTAGGAAAGGCGTTGATGTCAGAGGACGAAATTGCAATCATGGACGGCGGCAAATGTATTTTGCAGCTGCGGGGTGTGAGGCCGTTCTTCTCGGAGAAGTTCGACATTACCAAACACCCGCACTACAAGTACCTTGCGGACGCGGACAAAAAGAATACCTTTGAGGTGGACAGGTTCTTATCCACCCTGCGCCGGAAACGGCAGCAGGTAGTCGCACAGGACGAAAGTTTTGACCTGTACGAAATCGACCTGTCGGATGAAAATGCAGACGAATAA
PROTEIN sequence
Length: 279
GKTRSSILISCGARLAPFDIREVRELMEDDEMELDTIGDEKTVLFLIMSDTDTTFNFILAMLQSQLINLLCDRADDKYGGRLPVHVRLILDEFANIGQIPNFDKLIATIRSREISASIILQSQSQLKAIYKDAAEIISDNCDSVLFLSGRGKNAKEISDALGKETIDSFNTSENRGSQTSHGLNYQKLGKALMSEDEIAIMDGGKCILQLRGVRPFFSEKFDITKHPHYKYLADADKKNTFEVDRFLSTLRRKRQQVVAQDESFDLYEIDLSDENADE*