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L1_007_000M1_scaffold_101

Search features with annotation key words

Displaying items 61-86 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_101_61
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(80214..80765)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZEW3_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76084.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_101_62
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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80876..81796
DNA (921bp) protein (307aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001, ECO:0000313|EMBL:CBK91731.1}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001, ECO:0000313|EMBL:CBK91731.1};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Aspartate carbamoyltransferase n=3 Tax=Eubacterium rectale RepID=D4JH74_9FIRM
L1_007_000M1_scaffold_101_63
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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81808..82239
DNA (432bp) protein (144aa)
Aspartate carbamoyltransferase regulatory subunit n=4 Tax=Eubacterium RepID=C4ZEW1_EUBR3
Aspartate carbamoyltransferase, regulatory subunit
Aspartate carbamoyltransferase, regulatory subunit {ECO:0000313|EMBL:CBK92707.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_101_64
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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82248..84509
DNA (2262bp) protein (754aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Primosomal protein N (Replication factor Y)-superfamily II helicase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZEW0_EUBR3
primosomal protein N (replication factor Y) - superfamily II helicase
L1_007_000M1_scaffold_101_65
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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84531..85007
DNA (477bp) protein (159aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Peptide deformylase n=4 Tax=Eubacterium RepID=DEF_EUBR3
L1_007_000M1_scaffold_101_66
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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85062..85994
DNA (933bp) protein (311aa)
Methionyl-tRNA formyltransferase {ECO:0000255|HAMAP-Rule:MF_00182}; EC=2.1.2.9 {ECO:0000255|HAMAP-Rule:MF_00182};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Methionyl-tRNA formyltransferase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=FMT_EUBR3
methionyl-tRNA formyltransferase
L1_007_000M1_scaffold_101_67
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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86460..87164
DNA (705bp) protein (235aa)
Predicted Zn-dependent protease n=4 Tax=Eubacterium RepID=C4ZEV7_EUBR3
Predicted Zn-dependent protease
Predicted Zn-dependent protease {ECO:0000313|EMBL:CDC74189.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_101_68
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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87270..88679
DNA (1410bp) protein (470aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
ribosomal RNA small subunit methyltransferase RsmB (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase RsmB n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U255_9FIRM
L1_007_000M1_scaffold_101_69
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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88875..89939
DNA (1065bp) protein (355aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Probable dual-specificity RNA methyltransferase RlmN n=2 Tax=Eubacterium RepID=C4ZEV5_EUBR3
radical SAM enzyme, Cfr family
L1_007_000M1_scaffold_101_70
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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89940..90668
DNA (729bp) protein (243aa)
Serine/threonine protein phosphatase (EC:3.1.3.16)
Protein serine/threonine phosphatase n=4 Tax=Eubacterium RepID=C4ZEV4_EUBR3
Protein serine/threonine phosphatase {ECO:0000313|EMBL:ACR76075.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_101_71
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

90685..92826
DNA (2142bp) protein (714aa)
Protein kinase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZEV3_EUBR3
protein kinase
Protein kinase {ECO:0000313|EMBL:ACR76074.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_101_72
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

93311..94219
DNA (909bp) protein (303aa)
ribosome small subunit-dependent GTPase A (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820, ECO:0000313|EMBL:CBK92698.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Eubacterium rectale M104/1 RepID=D4JH64_9FIRM
L1_007_000M1_scaffold_101_73
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

94248..94898
DNA (651bp) protein (217aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:CBK92697.1}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:CBK92697.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Ribulose-phosphate 3-epimerase n=2 Tax=Eubacterium RepID=D4JH63_9FIRM
L1_007_000M1_scaffold_101_74
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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94975..95619
DNA (645bp) protein (215aa)
thiamine diphosphokinase (EC:2.7.6.2)
Thiamine diphosphokinase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UTX2_9FIRM
Thiamine diphosphokinase {ECO:0000313|EMBL:CDC74167.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_101_75
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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95726..99046
DNA (3321bp) protein (1107aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Eubacterium rectale M104/1 RepID=D4JH61_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBK92695.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
diguanylate cyclase (GGDEF) domain
L1_007_000M1_scaffold_101_76
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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99033..100259
DNA (1227bp) protein (409aa)
Predicted acetyltransferase involved in intracellular survival and related acetyltransferases n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TL61_9FIRM
Predicted acetyltransferase involved in intracellular survival and related acetyltransferases
Predicted acetyltransferase involved in intracellular survival and related acetyltransferases {ECO:0000313|EMBL:CDC74158.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_101_77
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

100281..101168
DNA (888bp) protein (296aa)
DegV protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZDA4_EUBR3
DegV protein
DegV protein {ECO:0000313|EMBL:ACR76067.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_101_78
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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101337..103331
DNA (1995bp) protein (665aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYT4_9FIRM
L1_007_000M1_scaffold_101_79
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

103667..104638
DNA (972bp) protein (324aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:CBK92691.1}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:CBK92691.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L-lactate dehydrogenase n=3 Tax=Eubacterium rectale RepID=C4ZDA2_EUBR3
L-lactate dehydrogenase
L1_007_000M1_scaffold_101_80
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

104799..105650
DNA (852bp) protein (284aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TL59_9FIRM
Protein of unknown function (DUF3737).
Uncharacterized protein {ECO:0000313|EMBL:CDC74153.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_007_000M1_scaffold_101_81
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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105654..106802
DNA (1149bp) protein (383aa)
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities (EC:2.6.1.-)
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities {ECO:0000313|EMBL:CBK92689.1}; EC=2.6.1.- {ECO:0000313|EMBL:CBK92689.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities n=1 Tax=Eubacterium rectale M104/1 RepID=D4JH55_9FIRM
L1_007_000M1_scaffold_101_82
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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107110..107475
DNA (366bp) protein (122aa)
Mn-dependent transcriptional regulator n=2 Tax=Eubacterium RepID=D4JH54_9FIRM
Mn-dependent transcriptional regulator
Mn-dependent transcriptional regulator {ECO:0000313|EMBL:CBK92688.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_101_83
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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107598..109346
DNA (1749bp) protein (583aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TPP7_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDC74150.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_000M1_scaffold_101_84
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

109350..111104
DNA (1755bp) protein (585aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYU0_9FIRM
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBK91753.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_000M1_scaffold_101_85
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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111433..112332
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F4I8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE45369.2}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
dTDP-glucose 4,6-dehydratase
L1_007_000M1_scaffold_101_86
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

112394..112507
DNA (114bp) protein (38aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6PU30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC13302.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Displaying items 61-86 of 86 in total

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