ggKbase home page

L1_007_000M1_scaffold_342_4

Organism: dasL1_007_000M1_concoct_66_fa

near complete RP 49 / 55 BSCG 51 / 51 MC: 3 ASCG 14 / 38
Location: 2307..5840

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 1177.0
  • Bit_score: 2294
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZBV9_EUBR3 similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 1177.0
  • Bit_score: 2294
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 1177.0
  • Bit_score: 2294
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Eubacterium rectale → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3534
GTGAAAGCATTTACAGAGCCACTCCTTTCCCTTGCGGGCTTTGAGGAGATGACAAAAACGGCAGAAAAATCGTCCGGACTTATATCTGTCACGGGATGCATAGATGCGCAAAAATCACAGATGATATATGCCTTTGGAGGTCACAGGAAAAACAAGCTTATTGTGACCTTTGGAGAGCAGAAGGCGAAGGAACTGTACGATGAGTACAGTTTTTTTGACAAAGAGGTGGTGTATTATCCATCAAAGGATGTGCTTTTTTACCAGTCGGATATCAGGGGCAATCTCCTGACAGCGGAGCGCATCAGGGCTTTGAAGGCTATCCATGAGCAGGAGAGTGTGACACTTGTGACCACATTTGATGCGCTGATGAATACGATGGCGCCGATAGAAAAGATGTGGGAAAACGTGCTTACACTTGAGCAGGGACAGCTTTTGGATTTGAAGGAAATTCAGGCTGCTCTTATCAGAATGGGCTATGAAAAAGAGTATCAGGTCCAGACGATGGGACAGTTTTCTGTCAGGGGCGGTATTCTTGATGTTTTTCCGCTGACGGAGGAGAATCCTATCCGAATTGAGCTGTGGGGAGACGAGATAGACACCATCAGATATTTTGACTGCGAGAGCCAGAAATCCATTGAAAATATTGATCGGGTGAGCATATATCCGGCGGCAGAGCTTGTACTTAGCGATGAGGAAAAGGCCGGGGGAATTGACAAGCTTAAGGCAGAGGCAAAGCGTGTGTCTGACAAGCTTAGAAAGCAGATGAAGACAGAGGAAGCACACAGAGTGACTGTGATGGCAGACGAGCTTATCGAGGAGTGGGGAGAGCTGTCCATGTATGCGGGCATGGATGCTTTTTTGTCGTACTTTTTTGACGAGAGAGTCGGGCTTTTGGATTATTTTAATCCATCGGACAGCCTTATATTTTTCGATGAGCTGACCAGATGTACAGAGCAGGGAAAGCTTACAGAGACTGAGTTTTCAGAGAGCATGAAGCAGAGACTTGCGATGGGATATATACTTCCGGGGCAGATGAACGGTCTTTTTACAGAAAAGGAGATTGTGGCAAAGCTCGAGAAGTATTCGTGCATCGCACTCGCTGCGCTCGATAATAAAGCAAACGGACTGCACCAGCTGGGAAGCTATGGTATTCACTGTCAGAGCGTCAGCCCATACAACAACAGCTTTGAGCTTTTGATAAAGGACTTAAAGCGCTATAAGAAAAACGGCTACAGAGTAATTCTTTTATCCGGTTCAAGGACAAGGGCAAAGAGGCTTTCAGAGGATATCACAGACCAGGGAATCACATGCTTTTACACTGAAAACTACGATCATGAGCTTTCCGAGGGGCAGATTATGGTCTGCTACGGCAAGGTGAGAAGAGGCTTTGAGTATCCTATCCTAAAGTTTGCCGTGATTACGGAGTCAGATATTTTTGGGGCGCAGCAGAAGAAAAAGAAGCGTCACCGCACCTATGAGGGTGAAAAAATACAGAGCTTTACCGATTTGTCGGTGGGGGACTATGTAGTGCATGAAAACCACGGACTAGGTATTTACCGCGGCATTGAAAAGCTTGAGGTGGACAAAAAGGTAAAGGACTACATCAAGATAGAGTATCAGGGTGGCTCCAATCTCTATATTCTTGCCACCCAGCTTGACATGATACAAAAATATGCCGGAAAGGATGCCAGAAAACCAAAGCTCAACAAGCTTGGCGGTCAGGAATGGACCAGAACAAAGAACCGTGTCAGAGGTGCGGTAAAGCAGATTGCAGGAGACCTGGTGAAGCTGTACGCACAGCGTGAGCAGCAAAACGGCTATGCCTTCGGCGAGGATACGGTGTGGCAGCGAGAGTTTGAGGAGCTTTTTCCTTTTGATGAGACTGAGGATCAGATTCTTGCAATTGAAGCCACAAAGACTGATATGCAGAGTCATAAAATAATGGACAGACTGATTTGCGGTGACGTGGGCTACGGCAAGACGGAGGTTGCAATCCGTGCGGCCTTCAAGGCGGTGCAGGACAGCAAGCAGGTGGCATATCTTGCCCCGACAACCATTCTGGCACAGCAGATTTACGATACGTTTTCGCAGAGGATGAAGGATTTTCCGGTGAATGTGGATTTGATGTGCCGTTTCAGAAGCGCAGCAGAGCAGAAAAAGACGATAGAAAAGCTTAAAAAGGGTGAGGTCGATATCATCATCGGAACACACCGTATACTCTCAAAGGATGTGCAGTTTAAGGATCTGGGACTTTTGGTAATCGATGAGGAGCAGCGCTTCGGAGTGACTCACAAGGAGAAGATTAAGCAGATGAAGGTCAATGTGGATGTGCTCACACTGACTGCTACACCGATTCCGAGGACACTCCACATGAGTTTAATCGGCATAAGGGATATGAGCGTGCTTGAGGAGCCGCCGATGGACCGTGTACCGATTCAGACATATGTCATGGAGTACAATGATGAGCTTGTCAGAGAGGCAATTAACAGGGAGCTTGCCAGAAACGGACAGGTGTACTATGTGTACAATAAGGTGCGCGACATAGCAGACATAACAGCAAAGCTGCAGGAGCTGGTGCCGGATGCGACTGTTGCATTTGCGCACGGACAGATGAAGGAGACGGAGCTTGAGCGCATCATGTACCGTTTCATCAATGGTGAAATAGATGTGCTTGTATCCACGACCATTATAGAGACCGGACTTGACATCTCAAACGTCAATACAATGATTATACACGATGCGGACAACATGGGACTTTCACAGCTTTATCAGCTCCGCGGACGAGTCGGCAGATCTAACCGTACTGCGTATGCATTTCTCATGTACAGGCGCAACAAGATGCTAAAAGAGGTGGCAGAAAAGCGTCTTGCAGCGATAAAGGAGTACTCAGACCTTGGCAGCGGCTTTAAGATTGCCATGAGAGATCTTGAAATCCGCGGTGCGGGCAATCTGCTCGGAGCGGAGCAGAGCGGCCATATGGAGGCTGTGGGCTATGATTTGTACTGCAAGATGTTGAGCGAGGCTGTAAAAGAGGCAAAGGGCATCGAGGATATCAGTGATAAATTTGACACGACGGTGGATATTGTGACCGATGCTTATATTCCGGCAGGTTATATTGCAAACGAATTCCAGAAGCTGGATATATATAAGCGTATTGCAGGCATAGAGACAGAGGAAGAGAAGGATGAGATGCTCGAGGAGCTCATAGACAGGTTTGGTGAACCACCAAAATCAGTGCTTAGCCTGCTTCGCGTGGCAAGGCTTAAGGCGTTGGCACATGCCGTATATATCACTGAGATAAAGCAGACCGGCTCACTGATAAAGCTTACTATGTTTGAACGGGCAAGGATAAATCCGGAGAAGATACCGGAGCTTATTACTCAGTATAAATCCTCCCTCAAATTCAATATGGCAGAAAACCCATATTTCACATTTGATTTAAAAAATGGCAGCGTGGCAAAGAAGCGGGATGTGCTTGATGTGGTGGAGGAACTGATTTCGCAAATGCGTAAGGAACTGATTACGGCTGAATAG
PROTEIN sequence
Length: 1178
VKAFTEPLLSLAGFEEMTKTAEKSSGLISVTGCIDAQKSQMIYAFGGHRKNKLIVTFGEQKAKELYDEYSFFDKEVVYYPSKDVLFYQSDIRGNLLTAERIRALKAIHEQESVTLVTTFDALMNTMAPIEKMWENVLTLEQGQLLDLKEIQAALIRMGYEKEYQVQTMGQFSVRGGILDVFPLTEENPIRIELWGDEIDTIRYFDCESQKSIENIDRVSIYPAAELVLSDEEKAGGIDKLKAEAKRVSDKLRKQMKTEEAHRVTVMADELIEEWGELSMYAGMDAFLSYFFDERVGLLDYFNPSDSLIFFDELTRCTEQGKLTETEFSESMKQRLAMGYILPGQMNGLFTEKEIVAKLEKYSCIALAALDNKANGLHQLGSYGIHCQSVSPYNNSFELLIKDLKRYKKNGYRVILLSGSRTRAKRLSEDITDQGITCFYTENYDHELSEGQIMVCYGKVRRGFEYPILKFAVITESDIFGAQQKKKKRHRTYEGEKIQSFTDLSVGDYVVHENHGLGIYRGIEKLEVDKKVKDYIKIEYQGGSNLYILATQLDMIQKYAGKDARKPKLNKLGGQEWTRTKNRVRGAVKQIAGDLVKLYAQREQQNGYAFGEDTVWQREFEELFPFDETEDQILAIEATKTDMQSHKIMDRLICGDVGYGKTEVAIRAAFKAVQDSKQVAYLAPTTILAQQIYDTFSQRMKDFPVNVDLMCRFRSAAEQKKTIEKLKKGEVDIIIGTHRILSKDVQFKDLGLLVIDEEQRFGVTHKEKIKQMKVNVDVLTLTATPIPRTLHMSLIGIRDMSVLEEPPMDRVPIQTYVMEYNDELVREAINRELARNGQVYYVYNKVRDIADITAKLQELVPDATVAFAHGQMKETELERIMYRFINGEIDVLVSTTIIETGLDISNVNTMIIHDADNMGLSQLYQLRGRVGRSNRTAYAFLMYRRNKMLKEVAEKRLAAIKEYSDLGSGFKIAMRDLEIRGAGNLLGAEQSGHMEAVGYDLYCKMLSEAVKEAKGIEDISDKFDTTVDIVTDAYIPAGYIANEFQKLDIYKRIAGIETEEEKDEMLEELIDRFGEPPKSVLSLLRVARLKALAHAVYITEIKQTGSLIKLTMFERARINPEKIPELITQYKSSLKFNMAENPYFTFDLKNGSVAKKRDVLDVVEELISQMRKELITAE*