ggKbase home page

L1_007_000M1_scaffold_14

Search features with annotation key words

Displaying items 61-90 of 218 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_14_61
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72164..73000
DNA (837bp) protein (279aa)
Transcription antiterminator LicT n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5T5_9FIRM
Transcription antiterminator LicT {ECO:0000313|EMBL:CDC67550.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
arbG; Beta-glucoside operon antiterminator
L1_007_000M1_scaffold_14_62
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

73108..75261
DNA (2154bp) protein (718aa)
PTS system, glucose-specific IIABC component {ECO:0000313|EMBL:CCO04107.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CCO04107.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ptsG; PTS system, glucose-specific IIABC component (EC:2.7.1.69)
PTS system glucose subfamily IIA component n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TD05_9FIRM
L1_007_000M1_scaffold_14_63
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

75281..75538
DNA (258bp) protein (86aa)
ptsH1; Phosphocarrier protein HPr (EC:2.7.11.-)
Phosphotransferase System HPr (HPr) Family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2B7_9FIRM
Phosphotransferase System HPr (HPr) Family {ECO:0000313|EMBL:CDC67548.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_14_64
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

75672..77306
DNA (1635bp) protein (545aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ptsI1; Phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9V5_9FIRM
L1_007_000M1_scaffold_14_65
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

77527..78087
DNA (561bp) protein (187aa)
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI92_9FIRM
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CDC67546.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
sig7; RNA polymerase sigma factor
L1_007_000M1_scaffold_14_66
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

78080..78883
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67545.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_14_67
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

78935..80557
DNA (1623bp) protein (541aa)
von Willebrand factor type A domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TD01_9FIRM
von Willebrand factor type A domain protein {ECO:0000313|EMBL:CDC67544.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L1_007_000M1_scaffold_14_68
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

80711..81166
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2B5_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCO04113.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_14_69
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

81163..81867
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67542.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L1_007_000M1_scaffold_14_70
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(81933..82727)
DNA (795bp) protein (265aa)
ABC transporter ATPase component (EC:3.6.3.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67541.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_14_71
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82738..83709)
DNA (972bp) protein (324aa)
ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5S5_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDC67540.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ABC transporter membrane component
L1_007_000M1_scaffold_14_72
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(83796..84818)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCZ6_9FIRM
ABC transporter extracellular-binding protein
ABC transporter extracellular-binding protein {ECO:0000313|EMBL:CCO04117.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_14_73
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

85037..87427
DNA (2391bp) protein (797aa)
Spore coat protein CotH n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO04118.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
conserved hypothetical protein
L1_007_000M1_scaffold_14_74
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(87480..88670)
DNA (1191bp) protein (397aa)
Putative metallophosphoesterase (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9U6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67537.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_14_75
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(88788..89894)
DNA (1107bp) protein (369aa)
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI86_9FIRM
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control {ECO:0000313|EMBL:CDC67536.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L1_007_000M1_scaffold_14_76
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(90010..91320)
DNA (1311bp) protein (437aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5S2_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDC67535.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L1_007_000M1_scaffold_14_77
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

91630..92556
DNA (927bp) protein (309aa)
Transcriptional regulator LysR family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCZ2_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCO04122.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_14_78
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(92635..93117)
DNA (483bp) protein (161aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Putative metallophosphoesterase (EC:3.1.4.-)
Phosphodiesterase family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2A6_9FIRM
L1_007_000M1_scaffold_14_79
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

93200..93460
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9U3_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04124.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_14_80
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

93512..93952
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI82_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04125.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_14_81
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

93939..94274
DNA (336bp) protein (112aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5R9_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04126.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_14_82
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(94271..95374)
DNA (1104bp) protein (368aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCY7_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04127.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_14_83
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(95475..96368)
DNA (894bp) protein (298aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2A3_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04128.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_14_84
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

96745..97272
DNA (528bp) protein (176aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9T9_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04129.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_14_85
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

97296..98015
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67526.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L1_007_000M1_scaffold_14_86
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

98148..98438
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5R2_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04131.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_14_87
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(98514..99335)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCY1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04132.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_14_88
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(99468..102416)
DNA (2949bp) protein (983aa)
Bacterial membrane protein YfhO n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T299_9FIRM
Bacterial membrane protein YfhO {ECO:0000313|EMBL:CDC67523.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Putative membrane protein
L1_007_000M1_scaffold_14_89
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(102403..103350)
DNA (948bp) protein (316aa)
Putative bactoprenol glucosyl transferase-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9T4_9FIRM
Glycosyltransferase Family 2 protein
Glycosyltransferase Family 2 protein {ECO:0000313|EMBL:CCO04134.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_14_90
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(103429..104013)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TI75_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04136.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying items 61-90 of 218 in total

View Taxonomy