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L1_007_000M1_scaffold_21_18

Organism: dasL1_007_000M1_concoct_78_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(23167..23730)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDB4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 187.0
  • Bit_score: 359
  • Evalue 2.00e-96
Sigma-70 region 2 {ECO:0000313|EMBL:CDC67679.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 187.0
  • Bit_score: 359
  • Evalue 2.80e-96
sig18; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 187.0
  • Bit_score: 357
  • Evalue 2.20e-96

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Taxonomy

Ruminococcus sp. CAG:57 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 564
ATGCAATCAAACGGTCTTTACATTCGTGTTATAGATGAAAGGCTTTTCAAAACAACAAAGGAGGTGACAGCTTTGACAAGAGATATTGACTACATAGTTGACAAATTTTCAGACGATATCTACCGAGCGGCACTGGCAGTCACAGGCAGCGTTCACGAGGCGGAGGATATAGTCAGCGAGGTCATAATAAAATATTTCACAAGGCAGGGTGAGCTTTTCTTCAATGATGACGAGCATCTTAAAGCGTGGCTGCTGAGAACGACGATAAATCTATCCAAAGACCTGCTAAGGTCGGCAGGCAGACGTCTGCGTGCAGAAAATGAGGTAAGTGCAAGCAGCGATTTTTCATCACCTGATATGCAGATATATGTGCAAAACGCTATAAACAGGCTGGATAAAAAATACAGGATAGTGCTTTATCTTTTTTATTATCAAGGCTGCAAGACCGATGAGATAGCCGACATTTTGGGAACAAGCAAGGGCACGGTCACATCAAGGCTGAAAAGAGCAAGAGAAAAACTAAAGCTTTCACTTTCAGACTACGAAAAGGAGATGAGCGTATGA
PROTEIN sequence
Length: 188
MQSNGLYIRVIDERLFKTTKEVTALTRDIDYIVDKFSDDIYRAALAVTGSVHEAEDIVSEVIIKYFTRQGELFFNDDEHLKAWLLRTTINLSKDLLRSAGRRLRAENEVSASSDFSSPDMQIYVQNAINRLDKKYRIVLYLFYYQGCKTDEIADILGTSKGTVTSRLKRAREKLKLSLSDYEKEMSV*