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L1_007_000M1_scaffold_14_21

Organism: dasL1_007_000M1_concoct_78_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 22443..23003

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma-H factor n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6Q4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 186.0
  • Bit_score: 357
  • Evalue 7.60e-96
sig5; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 186.0
  • Bit_score: 357
  • Evalue 1.60e-96
RNA polymerase sigma factor {ECO:0000313|EMBL:CCO04047.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 186.0
  • Bit_score: 357
  • Evalue 8.20e-96

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Taxonomy

Ruminococcus bicirculans → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 561
TTGAGAGGCGATCGGCAGGATCAGCAGAAAAAGCTTTCAGATGAGCAGCTTGTGCTAAATGCACAGAGTGACAAAACGGCTATCGGTGAGCTTATTGCGAGATATATCTGTACGGTGGAGTTTCTGGCAAAAAAATATGGCACCGAGGTTCACGAGGATCTTGTCCAAGAGGGGCTTATGGGGCTTCTGGGTGCGGTTAGGACCTATCGTGAAGACAAAAATGCGAAGTTTTCAACTTACGCTACAAAATGTATAAAAAATAAGATCATTTCGTCTGTTCACAGAAATGCACTTCTTTCAGGCGGCGAGGAAGCTGACCTTGAGGCTATTCTTGGCGGTGGTGGCACTGTACCTGAGGAGGTCGTAGTGGAGCGTGAGGAGCTGAATGAGCTTTATGATAAGATCACTTCTGCTCTTTCGGAGCAGGAATGGCAGGTATTTCAATCGTTTTTGAGAGGAATGTCATACAATCAGATAGCATTAGGCTTGGGCACGTCGGAAAAGGCGGTAGACAATGCAATGCAGAGAGTCAGACGGAAATTGAGATCACTGTTGAGATAG
PROTEIN sequence
Length: 187
LRGDRQDQQKKLSDEQLVLNAQSDKTAIGELIARYICTVEFLAKKYGTEVHEDLVQEGLMGLLGAVRTYREDKNAKFSTYATKCIKNKIISSVHRNALLSGGEEADLEAILGGGGTVPEEVVVEREELNELYDKITSALSEQEWQVFQSFLRGMSYNQIALGLGTSEKAVDNAMQRVRRKLRSLLR*