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L1_007_000M1_scaffold_14_29

Organism: dasL1_007_000M1_concoct_78_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 35904..36440

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor sigma-70 family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF33_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 178.0
  • Bit_score: 357
  • Evalue 5.60e-96
sig6; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 178.0
  • Bit_score: 357
  • Evalue 1.60e-96
RNA polymerase sigma factor {ECO:0000313|EMBL:CCO04057.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 178.0
  • Bit_score: 357
  • Evalue 7.80e-96

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Taxonomy

Ruminococcus bicirculans → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 537
ATGTTAGCTGTATGTATGACCTTGATAGACAACGATAAGGATCAGACGTCTTTTGAAGATTTTTATTACAGAAATCGTCAGATAGCCTATGCTTTTGCATACAAGATCTTGAATAATTCTGCGCTGGCAGAAGAGGCTTGTGCAAATGCTTTTTTCAGCATCGCAAAATGTTTTAAAAAAATTCACAATTATTCTTTGCACGATATGGACGCATATCTTATTAGAACTATTAGAAACGCCTGTTATGCGATCTACAATAAGGAAAATCAAAATCCAGCATCGTCTATATTTGATCTTAAGGTGGAAGATGAGCCGAGTGAGGATTTTTATGATGATATTGACTTAGATCTGCTTATAGATGCGGTAAGAAAGCTGGATGATAAACTAAAGTCTGTGATAGCATATAAGGTTTATTATGATCTGACCGCTGATGAGATCGCACAGATCATGGGCATTTCTAAGAGAACGGTATTTAATTATCTGAACAAAGCTAAAAGACAAATTTTAGATTTGATCGGTGGTGATCGTTTTGAATGA
PROTEIN sequence
Length: 179
MLAVCMTLIDNDKDQTSFEDFYYRNRQIAYAFAYKILNNSALAEEACANAFFSIAKCFKKIHNYSLHDMDAYLIRTIRNACYAIYNKENQNPASSIFDLKVEDEPSEDFYDDIDLDLLIDAVRKLDDKLKSVIAYKVYYDLTADEIAQIMGISKRTVFNYLNKAKRQILDLIGGDRFE*