ggKbase home page

L1_007_000M1_scaffold_3183_9

Organism: dasL1_007_000M1_concoct_78_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 6151..8163

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 667.0
  • Bit_score: 1133
  • Evalue 0.0
Topoisomerase IA (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 436.0
  • Bit_score: 808
  • Evalue 9.70e-232
DNA topoisomerase III n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C36E29 similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 668.0
  • Bit_score: 1287
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus flavefaciens → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2013
ATGATTCTTATCATCGGCGAAAAGCCGAGTGTTTCAAGAGCCATATCCGCCGTTGTCGGAGCTTCTTCCGCACACAAAGGCTACACCGAGGGAAACGGCTATATCGTTTCTTGGTGTGTCGGACATCTTGTCGGGCTGAAATATCCGAATGACTACGGCAACGGCTGGGACCGGAAGTGGAGCTTTTCACAGCTCCCTATGATACCCGACAAGTGGCAGTTTCAGGTCACGGACAGCACAAAGGCGCAGTACAATCTCCTGAAAAGCCTTATAAACAGGGACGATATTTCGGAGATCATCTGTGCAACAGACGCTGACCGTGAGGGCGAATGTATTTTCCGCTATGTCTATAATATGGCGAACTGCAAAAAAACCGTGAAGCGTTTGTGGGTTTCTTCTCTTGAAGAATCAGCTATCCGCAAGGCTCTTACAGCGATGAAGCCTATATCTGCATATGATAATCTGTTTTCAGCAGGCTATGCCCGTGCAAGGGCTGACTGGCTTGTGGGAATGAACGGTTCTCGGCTGTTTTCCGTTCGCTACGGCGGTAAGCTCAACATCGGGCGTGTTCAGACACCGACACTTGCAATGATCGTTCAGCGTGATGCCGAGGTAAACGGCTTTGTGAAGCAGAAGTATTTTACTGTTGACCTGAACTGCGGAGACTTTATTCTTTCTTCTGCGAGAATTGATGATGAAAATGCCGCTGATACGCTTGTTTACGGCTGTGACGGCAGTACGGTTACGATCAGCTCGGTCAAGCGTGAGGTCAAGACCGATAAAGCTCCAAAGCTGTATGACCTGACCACGCTCCAAAGAGAAGCAAACAAGGCTTTTGGTTACACGGCACAGCAGACGCTCGACTATACGCAGTCGCTCTATGAGGGCAAGCTCGTTACATACCCTCGCACGGATAGTCAATTCCTGTCCGATGATATGGCGCAGACGGCTCTTGATGTGGCAAAGCTCTGTGATACCTACTTCGGGTTCGGTATCTCGCATACTCCCGATATTTCTAAGGTCATCAACAACAGCAAGGTATCGGGACATCATGCAATTATCCCCACAAGCGGAATCGCAACGGCAGACCTTTCTTCTCTGCCGTCTGGCGAAAAGAATGTCCTTACGCTGATTGGAACAAAGCTGATCAGTGCAACGGCTCCGGCGCACAAGTATGAAGCTGTCAAGCTGACAGGTATCCGCAACGGTACGGAGTTCACGGCAACGGGCCGCACGGTGCTTGAAATGGGTTGGAAAGCCTATGCAAAGCAGTCCGACAAGAAGAATGAGGAAAAATCTCTGCCTGCGGTATCTGAGGGACAGACATTCACGGCAGCAGCAAGCAAGGGCGAACACTTCACTTCTCCGCCGAAGCCTTACACTGAGGACACACTTCTTTCCGCTATGGAGAGAGCCGGAAATGAGAACTATGACGAGGACACGGAGAAAAAGGGACTCGGCACTCCTGCCACAAGGGCCGCTACGATCGAAGCACTTGTAAAGAATGGCTATGTGGAGCGTGTCGGCAAACAGCTCAGGGCAACGGATAAGGGCAAGGAGCTTGTGACGGTCGTTCCCGATGAAGTCAAGTCTGCAAAGCTGACCGCTGAATGGGAATCGAAGTTACAGCAGATCGAACACGGCAGTCTGCCCGAAGCAGTCTTTATGTCGGGCATTACGCAGTTCATCACTGAAATGTGCGGTAAATATGGCTCAGTGGATAAGTCTGTTTCACTTTCTGACGGCAGTAATGAGCCTATCGGGAAATGCCCGAAGTGCGGTGCAGATGTAGTCAAGGGTAAGTTTGGCTTCTACTGCAAGGGCAAGTGCGGTATGAATATCGCAAAGGTGTACGGTGTGGAGCTTTCCGATACCCAGGTCAAGGGACTACTGAGCGGTAAATCGACTTCCTATACATCTAAGGGCAAAAAGACCATTGTGCGCCCTGAGCTCGTGGAGAATCCGTACAATGGGAAGATGTATTATCAGTGGAAAACGGAGAGGGGTATATAA
PROTEIN sequence
Length: 671
MILIIGEKPSVSRAISAVVGASSAHKGYTEGNGYIVSWCVGHLVGLKYPNDYGNGWDRKWSFSQLPMIPDKWQFQVTDSTKAQYNLLKSLINRDDISEIICATDADREGECIFRYVYNMANCKKTVKRLWVSSLEESAIRKALTAMKPISAYDNLFSAGYARARADWLVGMNGSRLFSVRYGGKLNIGRVQTPTLAMIVQRDAEVNGFVKQKYFTVDLNCGDFILSSARIDDENAADTLVYGCDGSTVTISSVKREVKTDKAPKLYDLTTLQREANKAFGYTAQQTLDYTQSLYEGKLVTYPRTDSQFLSDDMAQTALDVAKLCDTYFGFGISHTPDISKVINNSKVSGHHAIIPTSGIATADLSSLPSGEKNVLTLIGTKLISATAPAHKYEAVKLTGIRNGTEFTATGRTVLEMGWKAYAKQSDKKNEEKSLPAVSEGQTFTAAASKGEHFTSPPKPYTEDTLLSAMERAGNENYDEDTEKKGLGTPATRAATIEALVKNGYVERVGKQLRATDKGKELVTVVPDEVKSAKLTAEWESKLQQIEHGSLPEAVFMSGITQFITEMCGKYGSVDKSVSLSDGSNEPIGKCPKCGADVVKGKFGFYCKGKCGMNIAKVYGVELSDTQVKGLLSGKSTSYTSKGKKTIVRPELVENPYNGKMYYQWKTERGI*