ggKbase home page

L1_007_000M1_scaffold_13

Search features with annotation key words

Displaying items 31-60 of 255 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_13_31
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(34182..35183)
DNA (1002bp) protein (334aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
tRNA-dihydrouridine synthase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E3W1_9BACT
nifR3 family TIM-barrel protein
L1_007_000M1_scaffold_13_32
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

35312..35953
DNA (642bp) protein (214aa)
hypothetical protein
hypothetical protein; K06867 id=24658349 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC43861.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DSM 13855 / M31).;"
L1_007_000M1_scaffold_13_33
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(36281..36796)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E2M9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD96970.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_007_000M1_scaffold_13_34
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(36915..37181)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E230_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD96974.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L1_007_000M1_scaffold_13_35
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(37233..37439)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E230_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD96974.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L1_007_000M1_scaffold_13_36
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(37470..37715)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DWC6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD94328.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L1_007_000M1_scaffold_13_37
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(38061..39227)
DNA (1167bp) protein (389aa)
Aminotransferase class I and II n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E3X3_9BACT
Aminotransferase class I and II {ECO:0000313|EMBL:CDD96983.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
class I and II aminotransferase
L1_007_000M1_scaffold_13_38
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(39397..40962)
DNA (1566bp) protein (522aa)
Integral membrane protein MviN n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E3S4_9BACT
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
integral membrane protein MviN
L1_007_000M1_scaffold_13_39
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(40972..42063)
DNA (1092bp) protein (364aa)
Cytidyltransferase-related domain protein n=2 Tax=Akkermansia RepID=B2ULM4_AKKM8
cytidyltransferase
Cytidyltransferase-related domain protein {ECO:0000313|EMBL:ACD05411.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_000M1_scaffold_13_40
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(42212..42976)
DNA (765bp) protein (255aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E3S8_9BACT
L1_007_000M1_scaffold_13_41
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(43077..44537)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E3Y0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD96993.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_007_000M1_scaffold_13_42
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(44643..45398)
DNA (756bp) protein (252aa)
NCAIR mutase (PurE)-related protein-like protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E2Q2_9BACT
NCAIR mutase (PurE)-related protein-like protein {ECO:0000313|EMBL:CDD96995.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
NCAIR mutase-like protein
L1_007_000M1_scaffold_13_43
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(45395..46210)
DNA (816bp) protein (272aa)
ExsB family protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E3T3_9BACT
ExsB family protein {ECO:0000313|EMBL:CDD96996.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
ExsB family protein
L1_007_000M1_scaffold_13_44
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(46182..47411)
DNA (1230bp) protein (410aa)
UPF0272 protein BN616_00765 n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E612_9BACT
UPF0272 protein BN616_00765 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_007_000M1_scaffold_13_45
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

47613..48623
DNA (1011bp) protein (337aa)
Polyprenyl synthetase n=2 Tax=Akkermansia RepID=B2ULN0_AKKM8
polyprenyl synthetase
Polyprenyl synthetase {ECO:0000313|EMBL:ACD05417.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_000M1_scaffold_13_46
unknown

Not on your lists

comp(49206..49403)
DNA (198bp) protein (66aa)

This feature has no annotations

L1_007_000M1_scaffold_13_47
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

49835..50392
DNA (558bp) protein (186aa)
Pentapeptide repeat-containing protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E2Q7_9BACT
Pentapeptide repeat-containing protein {ECO:0000313|EMBL:CDD97000.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
pentapeptide repeat-containing protein
L1_007_000M1_scaffold_13_48
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(50499..51554)
DNA (1056bp) protein (352aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Predicted GTPases (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E3T7_9BACT
L1_007_000M1_scaffold_13_49
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(51551..52330)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E616_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97002.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_007_000M1_scaffold_13_50
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(52817..54175)
DNA (1359bp) protein (453aa)
Amino acid/peptide transporter n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E3Y9_9BACT
Amino acid/peptide transporter {ECO:0000313|EMBL:CDD97003.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
amino acid/peptide transporter
L1_007_000M1_scaffold_13_51
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(54328..56103)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2ULN2_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD05419.1}; Flags: Precursor;; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_000M1_scaffold_13_52
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

56433..56978
DNA (546bp) protein (182aa)
FeS assembly SUF system protein SufT n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E2R1_9BACT
FeS assembly SUF system protein SufT {ECO:0000313|EMBL:CDD97005.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
FeS assembly SUF system protein SufT
L1_007_000M1_scaffold_13_53
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

56983..57456
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E3U3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97006.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_007_000M1_scaffold_13_54
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(57586..57738)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E621_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97007.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_007_000M1_scaffold_13_55
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(57741..58628)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E262_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97009.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_007_000M1_scaffold_13_56
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(58977..60359)
DNA (1383bp) protein (461aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6K0S4_9BACT
L1_007_000M1_scaffold_13_57
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(60406..61830)
DNA (1425bp) protein (475aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase chain M n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E267_9BACT
Proton-translocating NADH-quinone oxidoreductase chain M {ECO:0000313|EMBL:CDD97014.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L1_007_000M1_scaffold_13_58
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(61852..63684)
DNA (1833bp) protein (611aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase chain L n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E3V5_9BACT
Proton-translocating NADH-quinone oxidoreductase chain L {ECO:0000313|EMBL:CDD97016.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L1_007_000M1_scaffold_13_59
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(63709..64026)
DNA (318bp) protein (106aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
NADH-quinone oxidoreductase subunit K n=3 Tax=Akkermansia RepID=NUOK_AKKM8
NADH-ubiquinone oxidoreductase chain 4L
L1_007_000M1_scaffold_13_60
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(64053..64979)
DNA (927bp) protein (309aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E3W0_9BACT
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 {ECO:0000313|EMBL:CDD97021.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
Displaying items 31-60 of 255 in total

View Taxonomy